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Protein

Photosystem I reaction center subunit XI

Gene

psaL

Organism
Thermosynechococcus elongatus (strain BP-1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Photosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Photosystem I reaction center subunit XIUniRule annotation
Alternative name(s):
PSI subunit VUniRule annotation
PSI-LUniRule annotation
Gene namesi
Name:psaLUniRule annotation
Ordered Locus Names:tlr2404
OrganismiThermosynechococcus elongatus (strain BP-1)
Taxonomic identifieri197221 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesSynechococcaceaeThermosynechococcus
Proteomesi
  • UP000000440 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei80 – 102HelicalUniRule annotationAdd BLAST23
Transmembranei117 – 139HelicalUniRule annotationAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, Photosystem I, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001946981 – 155Photosystem I reaction center subunit XIAdd BLAST155

Interactioni

Protein-protein interaction databases

STRINGi197221.tlr2404.

Structurei

Secondary structure

1155
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi9 – 11Combined sources3
Helixi21 – 24Combined sources4
Helixi26 – 33Combined sources8
Turni36 – 38Combined sources3
Helixi44 – 59Combined sources16
Helixi61 – 66Combined sources6
Turni68 – 71Combined sources4
Helixi75 – 101Combined sources27
Helixi111 – 113Combined sources3
Helixi115 – 141Combined sources27
Helixi143 – 151Combined sources9
Turni152 – 154Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1JB0X-ray2.50L2-155[»]
3PCQX-ray8.98L2-155[»]
4FE1X-ray4.92L2-155[»]
ProteinModelPortaliQ8DGB4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8DGB4.

Family & Domainsi

Sequence similaritiesi

Belongs to the PsaL family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108SIY. Bacteria.
ENOG4111KFU. LUCA.
HOGENOMiHOG000233808.
KOiK02699.
OMAiSEGWSQF.
OrthoDBiPOG091H14XU.

Family and domain databases

Gene3Di1.20.1240.10. 1 hit.
HAMAPiMF_00447. PSI_PsaL. 1 hit.
InterProiIPR003757. PSI_PsaL.
IPR022980. PSI_suXI.
[Graphical view]
PfamiPF02605. PsaL. 1 hit.
[Graphical view]
ProDomiPD005947. PSI_PsaL. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF81568. SSF81568. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8DGB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEELVKPYN GDPFVGHLST PISDSGLVKT FIGNLPAYRQ GLSPILRGLE
60 70 80 90 100
VGMAHGYFLI GPWVKLGPLR DSDVANLGGL ISGIALILVA TACLAAYGLV
110 120 130 140 150
SFQKGGSSSD PLKTSEGWSQ FTAGFFVGAM GSAFVAFFLL ENFSVVDGIM

TGLFN
Length:155
Mass (Da):16,252
Last modified:March 1, 2003 - v1
Checksum:iBEEE406BBA5797BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000039 Genomic DNA. Translation: BAC09956.1.
RefSeqiNP_683194.1. NC_004113.1.
WP_011058236.1. NC_004113.1.

Genome annotation databases

EnsemblBacteriaiBAC09956; BAC09956; BAC09956.
GeneIDi1010429.
KEGGitel:tlr2404.
PATRICi23930296. VBITheElo119873_2527.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000039 Genomic DNA. Translation: BAC09956.1.
RefSeqiNP_683194.1. NC_004113.1.
WP_011058236.1. NC_004113.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1JB0X-ray2.50L2-155[»]
3PCQX-ray8.98L2-155[»]
4FE1X-ray4.92L2-155[»]
ProteinModelPortaliQ8DGB4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi197221.tlr2404.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC09956; BAC09956; BAC09956.
GeneIDi1010429.
KEGGitel:tlr2404.
PATRICi23930296. VBITheElo119873_2527.

Phylogenomic databases

eggNOGiENOG4108SIY. Bacteria.
ENOG4111KFU. LUCA.
HOGENOMiHOG000233808.
KOiK02699.
OMAiSEGWSQF.
OrthoDBiPOG091H14XU.

Miscellaneous databases

EvolutionaryTraceiQ8DGB4.

Family and domain databases

Gene3Di1.20.1240.10. 1 hit.
HAMAPiMF_00447. PSI_PsaL. 1 hit.
InterProiIPR003757. PSI_PsaL.
IPR022980. PSI_suXI.
[Graphical view]
PfamiPF02605. PsaL. 1 hit.
[Graphical view]
ProDomiPD005947. PSI_PsaL. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF81568. SSF81568. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPSAL_THEEB
AccessioniPrimary (citable) accession number: Q8DGB4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 22, 2003
Last sequence update: March 1, 2003
Last modified: November 2, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.