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Q8DEG9 (Q8DEG9_VIBVU) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VV1_0621 EMBL AAO09135.1
OrganismVibrio vulnificus (strain CMCP6) [Complete proteome] [HAMAP] EMBL AAO09135.1
Taxonomic identifier216895 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length718 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
Q8DEG9 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: E0F55802E5660C88

FASTA71881,003
        10         20         30         40         50         60 
MYKDFFGFSE LPFSIVPNSR YLYLSQRHRE AITHLQAGLG DGGGFAMLTG EVGTGKTTVA 

        70         80         90        100        110        120 
KSMLANLDGQ TCAALLLNPT FSSVELLEAI CDEFGLSYTA NASLKQLNQR IYQFLLENHQ 

       130        140        150        160        170        180 
QNIQTLLVID EAQHLAADVL EQLRLLTNLE TETRKLLKVL LVGQPELQQL LQTTQLRQLA 

       190        200        210        220        230        240 
QRITGRYHLL PLNPQETADY IAFRIHTAGG NRTLFDHASA KVIAQYSHGI PRLINLICDK 

       250        260        270        280        290        300 
ALQLSYHQGD KKITKATVER ACQNVMAFQA EIYQQTSNRL SFPWGKVSVL AVCVAGVLAM 

       310        320        330        340        350        360 
AAYWPLIPTD NVVSTAPQVE LDRPATELPV PASVPAILVN DEQWLGESAV ARMTTRAQGL 

       370        380        390        400        410        420 
EELYKLWGYR ATRIDTLCEQ PSTSIFQCQV RQLNWQELQQ TPHPLLLTLQ HEGQRAYVVL 

       430        440        450        460        470        480 
LEVNSERVVL LTGEQRLTFT VPQLMSLWRG EVTDLWPMPL RETLRLGMHG EAIEVLDQLL 

       490        500        510        520        530        540 
AKALNDEPLM TTQFNAELMQ RVEWFQRWQA MTEDGIAGQR TLARLQHMVS LSEPWRELSQ 

       550        560        570        580        590        600 
AEKQGEEQVM RYPEFPSLAP LLRTYPLAET GDVINVADQT SPTLVASPSI PSEEKKTEDE 

       610        620        630        640        650        660 
RLFENLDLSG LSPELAQKVE NALLVETQTD NSPQAESTVS RLDLSAEKWH GRLPPLNLQT 

       670        680        690        700        710 
HMYSSDPKRR WLKINGAEFH QGEWIDNQIQ LVEISAQSVI VEFQGEQIEI PALYEWKG 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Vibrio vulnificus CMCP6."
Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.
Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CMCP6.
[2]"Structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio vulnificus type II secretion system."
Martynowski D., Grochulski P., Howard P.S.
Acta Crystallogr. D 69:142-149(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 334-584.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE016795 Genomic DNA. Translation: AAO09135.1.
RefSeqNP_759608.1. NC_004459.3.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4G54X-ray1.55A334-584[»]
ProteinModelPortalQ8DEG9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING216895.VV1_0621.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO09135; AAO09135; VV1_0621.
GeneID1177570.
KEGGvvu:VV1_0621.
PATRIC20158064. VBIVibVul94426_0603.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3267.
HOGENOMHOG000283550.
OMAIVPNSRY.
OrthoDBEOG6W45Q9.

Enzyme and pathway databases

BioCycVVUL216895:GIYM-577-MONOMER.

Family and domain databases

Gene3D1.10.101.10. 1 hit.
3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PfamPF01471. PG_binding_1. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF47090. SSF47090. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8DEG9_VIBVU
AccessionPrimary (citable) accession number: Q8DEG9
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 14, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)