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Q8DEG9

- Q8DEG9_VIBVU

UniProt

Q8DEG9 - Q8DEG9_VIBVU

Protein
Submitted name:

General secretion pathway protein A

Gene

VV1_0621

Organism
Vibrio vulnificus (strain CMCP6)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 80 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. nucleoside-triphosphatase activity Source: InterPro
    2. nucleotide binding Source: InterPro

    Enzyme and pathway databases

    BioCyciVVUL216895:GIYM-577-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    General secretion pathway protein AImported
    Gene namesi
    Ordered Locus Names:VV1_0621Imported
    OrganismiVibrio vulnificus (strain CMCP6)Imported
    Taxonomic identifieri216895 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002275: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi216895.VV1_0621.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4G54X-ray1.55A334-584[»]
    ProteinModelPortaliQ8DEG9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3267.
    HOGENOMiHOG000283550.
    OMAiIVPNSRY.
    OrthoDBiEOG6W45Q9.

    Family and domain databases

    Gene3Di1.10.101.10. 1 hit.
    3.40.50.300. 1 hit.
    InterProiIPR003593. AAA+_ATPase.
    IPR027417. P-loop_NTPase.
    IPR002477. Peptidoglycan-bd-like.
    [Graphical view]
    PfamiPF01471. PG_binding_1. 1 hit.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF47090. SSF47090. 1 hit.
    SSF52540. SSF52540. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8DEG9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYKDFFGFSE LPFSIVPNSR YLYLSQRHRE AITHLQAGLG DGGGFAMLTG    50
    EVGTGKTTVA KSMLANLDGQ TCAALLLNPT FSSVELLEAI CDEFGLSYTA 100
    NASLKQLNQR IYQFLLENHQ QNIQTLLVID EAQHLAADVL EQLRLLTNLE 150
    TETRKLLKVL LVGQPELQQL LQTTQLRQLA QRITGRYHLL PLNPQETADY 200
    IAFRIHTAGG NRTLFDHASA KVIAQYSHGI PRLINLICDK ALQLSYHQGD 250
    KKITKATVER ACQNVMAFQA EIYQQTSNRL SFPWGKVSVL AVCVAGVLAM 300
    AAYWPLIPTD NVVSTAPQVE LDRPATELPV PASVPAILVN DEQWLGESAV 350
    ARMTTRAQGL EELYKLWGYR ATRIDTLCEQ PSTSIFQCQV RQLNWQELQQ 400
    TPHPLLLTLQ HEGQRAYVVL LEVNSERVVL LTGEQRLTFT VPQLMSLWRG 450
    EVTDLWPMPL RETLRLGMHG EAIEVLDQLL AKALNDEPLM TTQFNAELMQ 500
    RVEWFQRWQA MTEDGIAGQR TLARLQHMVS LSEPWRELSQ AEKQGEEQVM 550
    RYPEFPSLAP LLRTYPLAET GDVINVADQT SPTLVASPSI PSEEKKTEDE 600
    RLFENLDLSG LSPELAQKVE NALLVETQTD NSPQAESTVS RLDLSAEKWH 650
    GRLPPLNLQT HMYSSDPKRR WLKINGAEFH QGEWIDNQIQ LVEISAQSVI 700
    VEFQGEQIEI PALYEWKG 718
    Length:718
    Mass (Da):81,003
    Last modified:March 1, 2003 - v1
    Checksum:iE0F55802E5660C88
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016795 Genomic DNA. Translation: AAO09135.1.
    RefSeqiNP_759608.1. NC_004459.3.
    WP_011078704.1. NC_004459.3.

    Genome annotation databases

    EnsemblBacteriaiAAO09135; AAO09135; VV1_0621.
    GeneIDi1177570.
    KEGGivvu:VV1_0621.
    PATRICi20158064. VBIVibVul94426_0603.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016795 Genomic DNA. Translation: AAO09135.1 .
    RefSeqi NP_759608.1. NC_004459.3.
    WP_011078704.1. NC_004459.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4G54 X-ray 1.55 A 334-584 [» ]
    ProteinModelPortali Q8DEG9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 216895.VV1_0621.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO09135 ; AAO09135 ; VV1_0621 .
    GeneIDi 1177570.
    KEGGi vvu:VV1_0621.
    PATRICi 20158064. VBIVibVul94426_0603.

    Phylogenomic databases

    eggNOGi COG3267.
    HOGENOMi HOG000283550.
    OMAi IVPNSRY.
    OrthoDBi EOG6W45Q9.

    Enzyme and pathway databases

    BioCyci VVUL216895:GIYM-577-MONOMER.

    Family and domain databases

    Gene3Di 1.10.101.10. 1 hit.
    3.40.50.300. 1 hit.
    InterProi IPR003593. AAA+_ATPase.
    IPR027417. P-loop_NTPase.
    IPR002477. Peptidoglycan-bd-like.
    [Graphical view ]
    Pfami PF01471. PG_binding_1. 1 hit.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47090. SSF47090. 1 hit.
    SSF52540. SSF52540. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Vibrio vulnificus CMCP6."
      Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.
      Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CMCP6Imported.
    2. "Structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio vulnificus type II secretion system."
      Martynowski D., Grochulski P., Howard P.S.
      Acta Crystallogr. D 69:142-149(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 334-584.

    Entry informationi

    Entry nameiQ8DEG9_VIBVU
    AccessioniPrimary (citable) accession number: Q8DEG9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 80 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3