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Q8DEG9

- Q8DEG9_VIBVU

UniProt

Q8DEG9 - Q8DEG9_VIBVU

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Protein
Submitted name:

General secretion pathway protein A

Gene

VV1_0621

Organism
Vibrio vulnificus (strain CMCP6)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciVVUL216895:GIYM-577-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
General secretion pathway protein AImported
Gene namesi
Ordered Locus Names:VV1_0621Imported
OrganismiVibrio vulnificus (strain CMCP6)Imported
Taxonomic identifieri216895 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002275: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi216895.VV1_0621.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4G54X-ray1.55A334-584[»]
ProteinModelPortaliQ8DEG9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3267.
HOGENOMiHOG000283550.
OMAiIVPNSRY.
OrthoDBiEOG6W45Q9.

Family and domain databases

Gene3Di1.10.101.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PfamiPF01471. PG_binding_1. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF47090. SSF47090. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8DEG9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYKDFFGFSE LPFSIVPNSR YLYLSQRHRE AITHLQAGLG DGGGFAMLTG
60 70 80 90 100
EVGTGKTTVA KSMLANLDGQ TCAALLLNPT FSSVELLEAI CDEFGLSYTA
110 120 130 140 150
NASLKQLNQR IYQFLLENHQ QNIQTLLVID EAQHLAADVL EQLRLLTNLE
160 170 180 190 200
TETRKLLKVL LVGQPELQQL LQTTQLRQLA QRITGRYHLL PLNPQETADY
210 220 230 240 250
IAFRIHTAGG NRTLFDHASA KVIAQYSHGI PRLINLICDK ALQLSYHQGD
260 270 280 290 300
KKITKATVER ACQNVMAFQA EIYQQTSNRL SFPWGKVSVL AVCVAGVLAM
310 320 330 340 350
AAYWPLIPTD NVVSTAPQVE LDRPATELPV PASVPAILVN DEQWLGESAV
360 370 380 390 400
ARMTTRAQGL EELYKLWGYR ATRIDTLCEQ PSTSIFQCQV RQLNWQELQQ
410 420 430 440 450
TPHPLLLTLQ HEGQRAYVVL LEVNSERVVL LTGEQRLTFT VPQLMSLWRG
460 470 480 490 500
EVTDLWPMPL RETLRLGMHG EAIEVLDQLL AKALNDEPLM TTQFNAELMQ
510 520 530 540 550
RVEWFQRWQA MTEDGIAGQR TLARLQHMVS LSEPWRELSQ AEKQGEEQVM
560 570 580 590 600
RYPEFPSLAP LLRTYPLAET GDVINVADQT SPTLVASPSI PSEEKKTEDE
610 620 630 640 650
RLFENLDLSG LSPELAQKVE NALLVETQTD NSPQAESTVS RLDLSAEKWH
660 670 680 690 700
GRLPPLNLQT HMYSSDPKRR WLKINGAEFH QGEWIDNQIQ LVEISAQSVI
710
VEFQGEQIEI PALYEWKG
Length:718
Mass (Da):81,003
Last modified:March 1, 2003 - v1
Checksum:iE0F55802E5660C88
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016795 Genomic DNA. Translation: AAO09135.1.
RefSeqiNP_759608.1. NC_004459.3.

Genome annotation databases

EnsemblBacteriaiAAO09135; AAO09135; VV1_0621.
GeneIDi1177570.
KEGGivvu:VV1_0621.
PATRICi20158064. VBIVibVul94426_0603.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016795 Genomic DNA. Translation: AAO09135.1 .
RefSeqi NP_759608.1. NC_004459.3.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4G54 X-ray 1.55 A 334-584 [» ]
ProteinModelPortali Q8DEG9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 216895.VV1_0621.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO09135 ; AAO09135 ; VV1_0621 .
GeneIDi 1177570.
KEGGi vvu:VV1_0621.
PATRICi 20158064. VBIVibVul94426_0603.

Phylogenomic databases

eggNOGi COG3267.
HOGENOMi HOG000283550.
OMAi IVPNSRY.
OrthoDBi EOG6W45Q9.

Enzyme and pathway databases

BioCyci VVUL216895:GIYM-577-MONOMER.

Family and domain databases

Gene3Di 1.10.101.10. 1 hit.
3.40.50.300. 1 hit.
InterProi IPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR002477. Peptidoglycan-bd-like.
[Graphical view ]
Pfami PF01471. PG_binding_1. 1 hit.
[Graphical view ]
SMARTi SM00382. AAA. 1 hit.
[Graphical view ]
SUPFAMi SSF47090. SSF47090. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Vibrio vulnificus CMCP6."
    Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.
    Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CMCP6Imported.
  2. "Structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio vulnificus type II secretion system."
    Martynowski D., Grochulski P., Howard P.S.
    Acta Crystallogr. D 69:142-149(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 334-584.

Entry informationi

Entry nameiQ8DEG9_VIBVU
AccessioniPrimary (citable) accession number: Q8DEG9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: October 29, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteomeImported

External Data

Dasty 3