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Q8DD39

- MURI_VIBVU

UniProt

Q8DD39 - MURI_VIBVU

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Protein

Glutamate racemase

Gene

murI

Organism
Vibrio vulnificus (strain CMCP6)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Provides the (R)-glutamate required for cell wall biosynthesis.UniRule annotation

Catalytic activityi

L-glutamate = D-glutamate.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. glutamate racemase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. cell wall organization Source: UniProtKB-KW
  2. peptidoglycan biosynthetic process Source: UniProtKB-HAMAP
  3. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradation, Peptidoglycan synthesis

Enzyme and pathway databases

BioCyciVVUL216895:GIYM-1065-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate racemaseUniRule annotation (EC:5.1.1.3UniRule annotation)
Gene namesi
Name:murIUniRule annotation
Ordered Locus Names:VV1_1175
OrganismiVibrio vulnificus (strain CMCP6)
Taxonomic identifieri216895 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002275: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 263263Glutamate racemasePRO_0000095532Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi216895.VV1_1175.

Structurei

3D structure databases

ProteinModelPortaliQ8DD39.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the aspartate/glutamate racemases family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0796.
HOGENOMiHOG000262397.
KOiK01776.
OMAiKPCPLFV.
OrthoDBiEOG6B6296.

Family and domain databases

Gene3Di3.40.50.1860. 1 hit.
HAMAPiMF_00258. Glu_racemase.
InterProiIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
PfamiPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMiSSF53681. SSF53681. 2 hits.
TIGRFAMsiTIGR00067. glut_race. 1 hit.
PROSITEiPS00923. ASP_GLU_RACEMASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8DD39-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MESSNQPNVL IFDSGVGGLS VFQEINKRLP EVNYYYLFDN QAYPYGELSQ
60 70 80 90 100
ETLLARVEAL VVKMTQQFAI DLVVIACNTA STIVLPTLRA KLPIPVVGVV
110 120 130 140 150
PAIKPASLLA NRAVGLIATP ATVTRQYTHD LIRDFAHEKE VELLGSTRLV
160 170 180 190 200
DIAEEKLRGR QVDQQELAMI LKPMKHKVDV AVLGCTHFPL LKEEIQQVLG
210 220 230 240 250
DEIILVDSGE AIARRVQSLL HQLSPQSTKT PWRIFSTAQP WDEAALNGSL
260
KTMGFNAIEL YPL
Length:263
Mass (Da):29,156
Last modified:March 1, 2003 - v1
Checksum:iE1D81F486EB764B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016795 Genomic DNA. Translation: AAO09646.1.
RefSeqiNP_760119.1. NC_004459.3.

Genome annotation databases

EnsemblBacteriaiAAO09646; AAO09646; VV1_1175.
GeneIDi1178101.
KEGGivvu:VV1_1175.
PATRICi20159157. VBIVibVul94426_1117.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016795 Genomic DNA. Translation: AAO09646.1 .
RefSeqi NP_760119.1. NC_004459.3.

3D structure databases

ProteinModelPortali Q8DD39.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 216895.VV1_1175.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO09646 ; AAO09646 ; VV1_1175 .
GeneIDi 1178101.
KEGGi vvu:VV1_1175.
PATRICi 20159157. VBIVibVul94426_1117.

Phylogenomic databases

eggNOGi COG0796.
HOGENOMi HOG000262397.
KOi K01776.
OMAi KPCPLFV.
OrthoDBi EOG6B6296.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci VVUL216895:GIYM-1065-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1860. 1 hit.
HAMAPi MF_00258. Glu_racemase.
InterProi IPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view ]
Pfami PF01177. Asp_Glu_race. 1 hit.
[Graphical view ]
SUPFAMi SSF53681. SSF53681. 2 hits.
TIGRFAMsi TIGR00067. glut_race. 1 hit.
PROSITEi PS00923. ASP_GLU_RACEMASE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Vibrio vulnificus CMCP6."
    Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.
    Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CMCP6.

Entry informationi

Entry nameiMURI_VIBVU
AccessioniPrimary (citable) accession number: Q8DD39
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 11, 2003
Last sequence update: March 1, 2003
Last modified: November 26, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3