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Q8DD39 (MURI_VIBVU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glutamate racemase

EC=5.1.1.3
Gene names
Name:murI
Ordered Locus Names:VV1_1175
OrganismVibrio vulnificus (strain CMCP6) [Complete proteome] [HAMAP]
Taxonomic identifier216895 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length263 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP-Rule MF_00258

Catalytic activity

L-glutamate = D-glutamate. HAMAP-Rule MF_00258

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP-Rule MF_00258

Sequence similarities

Belongs to the aspartate/glutamate racemases family.

Ontologies

Keywords
   Biological processCell shape
Cell wall biogenesis/degradation
Peptidoglycan synthesis
   Molecular functionIsomerase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

regulation of cell shape

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionglutamate racemase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 263263Glutamate racemase HAMAP-Rule MF_00258
PRO_0000095532

Sequences

Sequence LengthMass (Da)Tools
Q8DD39 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: E1D81F486EB764B4

FASTA26329,156
        10         20         30         40         50         60 
MESSNQPNVL IFDSGVGGLS VFQEINKRLP EVNYYYLFDN QAYPYGELSQ ETLLARVEAL 

        70         80         90        100        110        120 
VVKMTQQFAI DLVVIACNTA STIVLPTLRA KLPIPVVGVV PAIKPASLLA NRAVGLIATP 

       130        140        150        160        170        180 
ATVTRQYTHD LIRDFAHEKE VELLGSTRLV DIAEEKLRGR QVDQQELAMI LKPMKHKVDV 

       190        200        210        220        230        240 
AVLGCTHFPL LKEEIQQVLG DEIILVDSGE AIARRVQSLL HQLSPQSTKT PWRIFSTAQP 

       250        260 
WDEAALNGSL KTMGFNAIEL YPL 

« Hide

References

[1]"Complete genome sequence of Vibrio vulnificus CMCP6."
Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.
Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CMCP6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE016795 Genomic DNA. Translation: AAO09646.1.
RefSeqNP_760119.1. NC_004459.3.

3D structure databases

ProteinModelPortalQ8DD39.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING216895.VV1_1175.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO09646; AAO09646; VV1_1175.
GeneID1178101.
KEGGvvu:VV1_1175.
PATRIC20159157. VBIVibVul94426_1117.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0796.
HOGENOMHOG000262397.
KOK01776.
OMAKPCPLFV.
OrthoDBEOG6B6296.

Enzyme and pathway databases

BioCycVVUL216895:GIYM-1065-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.40.50.1860. 1 hit.
HAMAPMF_00258. Glu_racemase.
InterProIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
PfamPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMSSF53681. SSF53681. 2 hits.
TIGRFAMsTIGR00067. glut_race. 1 hit.
PROSITEPS00923. ASP_GLU_RACEMASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMURI_VIBVU
AccessionPrimary (citable) accession number: Q8DD39
Entry history
Integrated into UniProtKB/Swiss-Prot: April 11, 2003
Last sequence update: March 1, 2003
Last modified: May 14, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways