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Protein
Submitted name:

Glutamate decarboxylase, eukaryotic type

Gene

VV1_2824

Organism
Vibrio vulnificus (strain CMCP6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciVVUL216895:GIYM-2553-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase, eukaryotic typeImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:VV1_2824Imported
OrganismiVibrio vulnificus (strain CMCP6)Imported
Taxonomic identifieri216895 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002275: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi216895.VV1_2824.

Structurei

3D structure databases

ProteinModelPortaliQ8D8Z1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8D8Z1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAMEQKTADV SFDSLLKIFT IPEGPDSTLT QIEAKLSQNL NKFLGEHIVA
60 70 80 90 100
EEKPLREIEK DFSSAQIPER PSFVSDHTEH LLNTLVSHSV HTSSPSFIGH
110 120 130 140 150
MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIYSQ
160 170 180 190 200
DEAFYSHWMH SAEHSLGAFC SGGTIANITA LWVARNNALR AQGDFKGVEK
210 220 230 240 250
EGLFRAMKHY GYEGLAVLVS ERGHYSLKKA ADVLGIGQAG LVAIKTDENN
260 270 280 290 300
RVCPDALEAK IKELQAQNIK PFAVIGVAGT TETGSVDPLA EMAKICQKYG
310 320 330 340 350
CHFHVDAAWG GATLMSNKYR SLLDGVELAD SVTIDAHKQL YIPMGAGMVL
360 370 380 390 400
FKDPNAMKSI EHHAQYILRK GSKDLGSHTL EGSRSGMAML VYASMHIISR
410 420 430 440 450
PGYELLINQS IEKAKYFADL IKQQDDFELI SEPELCLLTY RYIPARVKQA
460 470 480 490 500
LAAANAKQQL ELNELLNELT KFTQKRQRET GRSFVSRTRL NPAHWSRMNT
510 520 530 540 550
IVFRVVLANP LTSFDILASV LEEQRNIIVH QAPNLLAKIN KLADGILTST

QSS
Length:553
Mass (Da):61,418
Last modified:March 1, 2003 - v1
Checksum:iF496304FF30113CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016795 Genomic DNA. Translation: AAO11161.1.
RefSeqiNP_761634.1. NC_004459.3.
WP_011080653.1. NC_004459.3.

Genome annotation databases

EnsemblBacteriaiAAO11161; AAO11161; VV1_2824.
GeneIDi1179664.
KEGGivvu:VV1_2824.
PATRICi20162628. VBIVibVul94426_2789.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016795 Genomic DNA. Translation: AAO11161.1.
RefSeqiNP_761634.1. NC_004459.3.
WP_011080653.1. NC_004459.3.

3D structure databases

ProteinModelPortaliQ8D8Z1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216895.VV1_2824.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO11161; AAO11161; VV1_2824.
GeneIDi1179664.
KEGGivvu:VV1_2824.
PATRICi20162628. VBIVibVul94426_2789.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciVVUL216895:GIYM-2553-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Vibrio vulnificus CMCP6."
    Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.
    Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CMCP6Imported.

Entry informationi

Entry nameiQ8D8Z1_VIBVU
AccessioniPrimary (citable) accession number: Q8D8Z1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: February 4, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.