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Protein
Submitted name:

Periplasmic alpha-amylase

Gene

VV2_0903

Organism
Vibrio vulnificus (strain CMCP6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciVVUL216895:GIYM-3716-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:VV2_0903Imported
OrganismiVibrio vulnificus (strain CMCP6)Imported
Taxonomic identifieri216895 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002275 Componenti: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi216895.VV2_0903.

Structurei

3D structure databases

ProteinModelPortaliQ8D5L1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000273912.
KOiK01176.
OMAiLRSFMNW.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8D5L1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLNAITLTL LLSSTAAIAE PNLTISTTTN SRDFPLSAEQ PLVVPLVKES
60 70 80 90 100
YQLKITGLEG DCQAPDAQVI KFNQPIALNC GKVTELPLKI RFTGDYSFEL
110 120 130 140 150
DANANTLTFK REPKKVAKTE FKRPLPQVTC EVYQGGEVTI ELGDSFKDGT
160 170 180 190 200
SLRDAYSGQV VSVKKGKVSL TPSAQSGGLV LLEPVKQNKK ARPFDYRNAN
210 220 230 240 250
IYFVMVDRFN NGDTSNDQSY GRQKDGKEEI GTFHGGDLKG VIEKLDYIQR
260 270 280 290 300
LGTDAIWLSP IVEQVHGFVG GGDSGSFPFY AYHGYWTRDF TKIDENFGRD
310 320 330 340 350
EDLKTLVEEA HKRGIKVLLD AVINHSGYST LADLQFDGMQ VTTKEANLPE
360 370 380 390 400
KWANWQPTSG ENWHSYHSAI DYQSQNWSQW WGADWVRTGL PGYQQPGSSD
410 420 430 440 450
ITLSLAGLPD FRTESTQAVT PPQWLLENPG TRVVARDNYT VSDYLIEWQT
460 470 480 490 500
DWVKRFGIDG YRVDTVKHVE GEVWKRLKQE ATKSLDAWRK ANGQSGAPFW
510 520 530 540 550
MMGEVWGHSA YRSPYFDDGF DALINFDMQK KLDKGAACFS QMADTYRDYA
560 570 580 590 600
NTIAQQSDFN PVSYMSSHDT ELFFSRFKDY AVQRNAANAL LLSPGAVQIY
610 620 630 640 650
YGDEVGRNIG PYADDFHQGT RSDMVWQLSA EQQTLLNHWQ KLGQFRRAHP
660 670 680
AIGAGVHQEI EQTGAYVFSR TLGDDKVVVA FVGHAVQ
Length:687
Mass (Da):77,060
Last modified:March 1, 2003 - v1
Checksum:iE8BBF4B5C39D7CCB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016796 Genomic DNA. Translation: AAO07820.1.
RefSeqiNP_762830.1. NC_004460.2.
WP_011081813.1. NC_004460.2.

Genome annotation databases

EnsemblBacteriaiAAO07820; AAO07820; VV2_0903.
KEGGivvu:VV2_0903.
PATRICi20165198. VBIVibVul94426_4056.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016796 Genomic DNA. Translation: AAO07820.1.
RefSeqiNP_762830.1. NC_004460.2.
WP_011081813.1. NC_004460.2.

3D structure databases

ProteinModelPortaliQ8D5L1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216895.VV2_0903.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO07820; AAO07820; VV2_0903.
KEGGivvu:VV2_0903.
PATRICi20165198. VBIVibVul94426_4056.

Phylogenomic databases

HOGENOMiHOG000273912.
KOiK01176.
OMAiLRSFMNW.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciVVUL216895:GIYM-3716-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Vibrio vulnificus CMCP6."
    Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.
    Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CMCP6Imported.

Entry informationi

Entry nameiQ8D5L1_VIBVU
AccessioniPrimary (citable) accession number: Q8D5L1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 29, 2015
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.