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Q8D0M2

- Q8D0M2_YERPE

UniProt

Q8D0M2 - Q8D0M2_YERPE

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Protein

Superoxide dismutase

Gene
sodB, y1951, YP_2172
Organism
Yersinia pestis
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:y1951Imported, YP_2172Imported
OrganismiYersinia pestis
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000002490: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi187410.y1951.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8D0M2-1 [UniParc]FASTAAdd to Basket

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MKSKHPEHPR KERAMSFELP ALPYAQNALE PHISAETLEY HYGKHHNTYV    50
INLNNLIKDT EFAGKSLEEI VKTANGGVFN NAAQVWNHTF YWHCLSPNGG 100
GEPTGKIAEA INKSFGSFAE FKAQFTDAAV KNFGAGWTWL VKKADGTLAI 150
VSTSNAGTPL TTTDKPLLTV DVWEHAYYID YRNARPKYLE NFWAVVNWSF 200
AEKNLD 206
Length:206
Mass (Da):23,179
Last modified:March 1, 2003 - v1
Checksum:iA9377B882D30E0FE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE009952 Genomic DNA. Translation: AAM85517.1.
AE017042 Genomic DNA. Translation: AAS62380.1.
RefSeqiNP_669266.1. NC_004088.1.
NP_993503.1. NC_005810.1.

Genome annotation databases

EnsemblBacteriaiAAM85517; AAM85517; y1951.
AAS62380; AAS62380; YP_2172.
GeneIDi1146898.
2765100.
KEGGiypk:y1951.
ypm:YP_2172.
PATRICi18623096. VBIYerPes99487_2482.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE009952 Genomic DNA. Translation: AAM85517.1 .
AE017042 Genomic DNA. Translation: AAS62380.1 .
RefSeqi NP_669266.1. NC_004088.1.
NP_993503.1. NC_005810.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 187410.y1951.

Protocols and materials databases

DNASUi 1146898.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM85517 ; AAM85517 ; y1951 .
AAS62380 ; AAS62380 ; YP_2172 .
GeneIDi 1146898.
2765100.
KEGGi ypk:y1951.
ypm:YP_2172.
PATRICi 18623096. VBIYerPes99487_2482.

Phylogenomic databases

HOGENOMi HOG000013584.
KOi K04564.
OrthoDBi EOG63NMNT.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIMImported and KIM10+ / Biovar Mediaevalis.
  2. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001Imported and 91001 / Biovar Mediaevalis.
  3. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
    Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
    J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 91001Imported.

Entry informationi

Entry nameiQ8D0M2_YERPE
AccessioniPrimary (citable) accession number: Q8D0M2
Secondary accession number(s): Q74TI5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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