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Protein

Superoxide dismutase

Gene

sodB

Organism
Yersinia pestis
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi41Divalent metal cationUniRule annotation1
Metal bindingi88Divalent metal cationUniRule annotation1
Metal bindingi171Divalent metal cationUniRule annotation1
Metal bindingi175Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:y1951Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000002490 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ8D0M2.

Structurei

3D structure databases

ProteinModelPortaliQ8D0M2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013584.
KOiK04564.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8D0M2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSKHPEHPR KERAMSFELP ALPYAQNALE PHISAETLEY HYGKHHNTYV
60 70 80 90 100
INLNNLIKDT EFAGKSLEEI VKTANGGVFN NAAQVWNHTF YWHCLSPNGG
110 120 130 140 150
GEPTGKIAEA INKSFGSFAE FKAQFTDAAV KNFGAGWTWL VKKADGTLAI
160 170 180 190 200
VSTSNAGTPL TTTDKPLLTV DVWEHAYYID YRNARPKYLE NFWAVVNWSF

AEKNLD
Length:206
Mass (Da):23,179
Last modified:March 1, 2003 - v1
Checksum:iA9377B882D30E0FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM85517.1.

Genome annotation databases

EnsemblBacteriaiAAM85517; AAM85517; y1951.
KEGGiypk:y1951.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ8D0M2_YERPE
AccessioniPrimary (citable) accession number: Q8D0M2
Secondary accession number(s): Q74TI5
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 5, 2017
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported