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Q8D0M2

- Q8D0M2_YERPE

UniProt

Q8D0M2 - Q8D0M2_YERPE

Protein

Superoxide dismutase

Gene

sodB

Organism
Yersinia pestis
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 89 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodBImported
    Ordered Locus Names:y1951Imported, YP_2172Imported
    OrganismiYersinia pestisImported
    Taxonomic identifieri632 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
    ProteomesiUP000001019: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi187410.y1951.

    Structurei

    3D structure databases

    SMRiQ8D0M2. Positions 16-205.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000013584.
    KOiK04564.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8D0M2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKSKHPEHPR KERAMSFELP ALPYAQNALE PHISAETLEY HYGKHHNTYV    50
    INLNNLIKDT EFAGKSLEEI VKTANGGVFN NAAQVWNHTF YWHCLSPNGG 100
    GEPTGKIAEA INKSFGSFAE FKAQFTDAAV KNFGAGWTWL VKKADGTLAI 150
    VSTSNAGTPL TTTDKPLLTV DVWEHAYYID YRNARPKYLE NFWAVVNWSF 200
    AEKNLD 206
    Length:206
    Mass (Da):23,179
    Last modified:March 1, 2003 - v1
    Checksum:iA9377B882D30E0FE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009952 Genomic DNA. Translation: AAM85517.1.
    AE017042 Genomic DNA. Translation: AAS62380.1.
    RefSeqiNP_669266.1. NC_004088.1.
    NP_993503.1. NC_005810.1.

    Genome annotation databases

    EnsemblBacteriaiAAM85517; AAM85517; y1951.
    AAS62380; AAS62380; YP_2172.
    GeneIDi1146898.
    2765100.
    KEGGiypk:y1951.
    ypm:YP_2172.
    PATRICi18623096. VBIYerPes99487_2482.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009952 Genomic DNA. Translation: AAM85517.1 .
    AE017042 Genomic DNA. Translation: AAS62380.1 .
    RefSeqi NP_669266.1. NC_004088.1.
    NP_993503.1. NC_005810.1.

    3D structure databases

    SMRi Q8D0M2. Positions 16-205.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 187410.y1951.

    Protocols and materials databases

    DNASUi 1146898.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM85517 ; AAM85517 ; y1951 .
    AAS62380 ; AAS62380 ; YP_2172 .
    GeneIDi 1146898.
    2765100.
    KEGGi ypk:y1951.
    ypm:YP_2172.
    PATRICi 18623096. VBIYerPes99487_2482.

    Phylogenomic databases

    HOGENOMi HOG000013584.
    KOi K04564.
    OrthoDBi EOG63NMNT.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KIMImported.
    2. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
      Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
      , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
      DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 91001Imported and 91001 / Biovar MediaevalisImported.
    3. "Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus."
      Zhou D., Tong Z., Song Y., Han Y., Pei D., Pang X., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R., Du Z., Wang J., Guo Z., Wang J., Huang P., Yang R.
      J. Bacteriol. 186:5147-5152(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 91001Imported.

    Entry informationi

    Entry nameiQ8D0M2_YERPE
    AccessioniPrimary (citable) accession number: Q8D0M2
    Secondary accession number(s): Q74TI5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 89 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3