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Protein
Submitted name:

Superoxide dismutase, iron

Gene

sodB

Organism
Yersinia pestis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase, ironImported
Gene namesi
Name:sodBImported
Ordered Locus Names:y1951Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000002490 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi214092.YPO2386.

Structurei

3D structure databases

ProteinModelPortaliQ8D0M2.
SMRiQ8D0M2. Positions 16-205.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8D0M2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSKHPEHPR KERAMSFELP ALPYAQNALE PHISAETLEY HYGKHHNTYV
60 70 80 90 100
INLNNLIKDT EFAGKSLEEI VKTANGGVFN NAAQVWNHTF YWHCLSPNGG
110 120 130 140 150
GEPTGKIAEA INKSFGSFAE FKAQFTDAAV KNFGAGWTWL VKKADGTLAI
160 170 180 190 200
VSTSNAGTPL TTTDKPLLTV DVWEHAYYID YRNARPKYLE NFWAVVNWSF

AEKNLD
Length:206
Mass (Da):23,179
Last modified:March 1, 2003 - v1
Checksum:iA9377B882D30E0FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM85517.1.
RefSeqiNP_669266.1. NC_004088.1.
NP_993503.1. NC_005810.1.

Genome annotation databases

EnsemblBacteriaiAAM85517; AAM85517; y1951.
AAS62380; AAS62380; YP_2172.
KEGGiypk:y1951.
ypm:YP_2172.
PATRICi18623096. VBIYerPes99487_2482.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM85517.1.
RefSeqiNP_669266.1. NC_004088.1.
NP_993503.1. NC_005810.1.

3D structure databases

ProteinModelPortaliQ8D0M2.
SMRiQ8D0M2. Positions 16-205.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi214092.YPO2386.

Protocols and materials databases

DNASUi1146898.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM85517; AAM85517; y1951.
AAS62380; AAS62380; YP_2172.
KEGGiypk:y1951.
ypm:YP_2172.
PATRICi18623096. VBIYerPes99487_2482.

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIM10+ / Biovar MediaevalisImported.

Entry informationi

Entry nameiQ8D0M2_YERPE
AccessioniPrimary (citable) accession number: Q8D0M2
Secondary accession number(s): Q74TI5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: June 24, 2015
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.