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Q8CY57 (Q8CY57_BIFLO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:cscA EMBL AAN23970.1
Ordered Locus Names:BL0105
OrganismBifidobacterium longum (strain NCC 2705)
Taxonomic identifier206672 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length518 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 32 family. RuleBase RU000449

Sequences

Sequence LengthMass (Da)Tools
Q8CY57 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: D82267355241B089

FASTA51858,130
        10         20         30         40         50         60 
MTDFTPETPV LTPIHDHAAE LAKAEAGVAE MAANRNNRWY PKYHIASNGG WINDPNGLCF 

        70         80         90        100        110        120 
YKGRWHVFYQ LHPYGTQWGP MHWGHVSSTD MLNWKREPIM FAPSLEQEKD GVFSGSAVID 

       130        140        150        160        170        180 
DNGDLRFYYT GHRWANGHDN TGGDWQVQMT ALPDNDELTS ATKQGMIIDC PTDKVDHHYR 

       190        200        210        220        230        240 
DPKVWKTGDT WYMTFGVSSA DKRGQMWLFS SKDMVRWEYE RVLFQHPDPD VFMLECPDFF 

       250        260        270        280        290        300 
PIKDKDGNEK WVIGFSAMGS KPSGFMNRNV SNAGYMIGTW EPGGEFKPET EFRLWDCGHN 

       310        320        330        340        350        360 
YYAPQSFNVD GRQIVYGWMS PFVQPIPMED DGWCGQLTLP REITLGDDGD VVTAPVAEME 

       370        380        390        400        410        420 
GLREDTLDHG SITLDMDGEQ IIADDAEAVE IEMTIDLAAS TAERAGLKIH ATEDGAYTYV 

       430        440        450        460        470        480 
AYDDQIGRVV VDRQAMANGD RGYRAAPLTD AELASGKLDL RVFVDRGSVE VYVNGGHQVL 

       490        500        510 
SSYSYASEGP RAIKLVAESG SLKVDSLKLH HMKSIGLE 

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References

[1]"The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract."
Schell M.A., Karmirantzou M., Snel B., Vilanova D., Berger B., Pessi G., Zwahlen M.-C., Desiere F., Bork P., Delley M., Pridmore R.D., Arigoni F.
Proc. Natl. Acad. Sci. U.S.A. 99:14422-14427(2002) [PubMed: 12381787] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCC 2705.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014295 Genomic DNA. Translation: AAN23970.1.
RefSeqNP_695334.1. NC_004307.2.

3D structure databases

ProteinModelPortalQ8CY57.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1022296.
GenomeReviewsGene locus BL0105 in contig AE014295_GR.
KEGGblo:BL0105.
NMPDRfig|206672.1.peg.103.
PATRIC21117253. VBIBifLon107831_0112.

Phylogenomic databases

HOGENOMHBG693902.
OMADSNAQQV.
PhylomeDBQ8CY57.
ProtClustDBCLSK572494.

Family and domain databases

InterProIPR008985. ConA-like_lec_gl.
IPR001362. Glyco_hydro_32.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK01193.
PfamPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SMARTSM00640. Glyco_32. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8CY57_BIFLO
AccessionPrimary (citable) accession number: Q8CY57
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 25, 2012
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)