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Q8CTD6 (PGK_STAES) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoglycerate kinase
EC=2.7.2.3
Gene names
Name:pgk
Ordered Locus Names:SE_0558
OrganismStaphylococcus epidermidis (strain ATCC 12228) [Complete proteome] [HAMAP]
Taxonomic identifier176280 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Staphylococcus ›

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate. HAMAP-Rule MF_00145

Pathway

Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 2/5. HAMAP-Rule MF_00145

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00145

Subcellular location

Cytoplasm Potential HAMAP-Rule MF_00145.

Sequence similarities

Belongs to the phosphoglycerate kinase family.

Ontologies

Keywords
   Biological processGlycolysis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycolysis

Inferred from electronic annotation. Source: HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

phosphoglycerate kinase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 396396Phosphoglycerate kinase HAMAP-Rule MF_00145
PRO_0000146008

Regions

Nucleotide binding352 – 3554ATP By similarity
Region21 – 233Substrate binding By similarity
Region59 – 624Substrate binding By similarity

Sites

Binding site361Substrate By similarity
Binding site1191Substrate By similarity
Binding site1561Substrate By similarity
Binding site2061ATP By similarity
Binding site3251ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q8CTD6 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: ACB0ADE00A399033

FASTA39642,740
        10         20         30         40         50         60 
MAKKIVSDLD LKGKVVLERA DFNVPIKDGE ITNDNRIVQA LPTIEYIIEQ GGKLVLFSHL 

        70         80         90        100        110        120 
GKVKEESDKE GLSLKPVAEN LSKKLGKEVI FVPETRGEKL ETAIENLNEG DVLLVENTRF 

       130        140        150        160        170        180 
EDLDGKKESK NDPELGKYWA SLGDVFVNDA FGTAHREHAS NVGISTHLET AAGYLMEKEI 

       190        200        210        220        230        240 
KFIGGVVNDP QKPVVAILGG AKVSDKINVI KNLVNIADKI LIGGGMAYTF IKAQGKEIGL 

       250        260        270        280        290        300 
SLLEEDKIDF AKDLLENNGD QIVLPVDCKI AKEFSNDAKI TEVSINEIPS DQEAMDIGPK 

       310        320        330        340        350        360 
TVELFNKELQ GAHTVVWNGP MGVFEFSNFA KGTIGVCESI AKLEDATTII GGGDSAAAAI 

       370        380        390 
SLGFEDDFTH ISTGGGASLE YLEGKELPGI KAINDK

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References

[1]"Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228)."
Zhang Y.-Q., Ren S.-X., Li H.-L., Wang Y.-X., Fu G., Yang J., Qin Z.-Q., Miao Y.-G., Wang W.-Y., Chen R.-S., Shen Y., Chen Z., Yuan Z.-H., Zhao G.-P., Qu D., Danchin A., Wen Y.-M.
Mol. Microbiol. 49:1577-1593(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 12228.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE015929 Genomic DNA. Translation: AAO04155.1.
RefSeqNP_764113.1. NC_004461.1.

3D structure databases

ProteinModelPortalQ8CTD6.
ModBaseSearch...

Protein-protein interaction databases

STRING176280.SE0558.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO04155; AAO04155; SE_0558.
GeneID1055969.
KEGGsep:SE0558.
PATRIC19606903. VBIStaEpi113981_0529.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0126.
KOK00927.
OMAEKKNDEA.
ProtClustDBPRK00073.

Enzyme and pathway databases

BioCycSEPI176280:GCDG-561-MONOMER.
UniPathwayUPA00109; UER00185.

Family and domain databases

Gene3D3.40.50.1260. 1 hit.
3.40.50.1270. 1 hit.
HAMAPMF_00145. Phosphoglyc_kinase.
InterProIPR001576. Phosphoglycerate_kinase.
IPR015901. Phosphoglycerate_kinase_C.
IPR015824. Phosphoglycerate_kinase_N.
[Graphical view]
PANTHERPTHR11406. PTHR11406. 1 hit.
PfamPF00162. PGK. 1 hit.
[Graphical view]
PIRSFPIRSF000724. Pgk. 1 hit.
PRINTSPR00477. PHGLYCKINASE.
SUPFAMSSF53748. PGK. 1 hit.
PROSITEPS00111. PGLYCERATE_KINASE. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePGK_STAES
AccessionPrimary (citable) accession number: Q8CTD6
Entry history
Integrated into UniProtKB/Swiss-Prot: April 23, 2003
Last sequence update: March 1, 2003
Last modified: May 29, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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