Q8CRC6 (ARAB_STAES) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribulokinase
EC=2.7.1.16

Gene names

Name:	araB
Ordered Locus Names:	SE_1914

Organism

Staphylococcus epidermidis (strain ATCC 12228) [Complete proteome] [HAMAP]

Taxonomic identifier

176280 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Staphylococcus

Protein attributes

Sequence length	536 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520
Sequence similarities	Belongs to the ribulokinase family.

Ontologies

Keywords
Biological process	Arabinose catabolism Carbohydrate metabolism
Ligand	ATP-binding Nucleotide-binding
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 536	536	Ribulokinase HAMAP MF_00520		PRO_0000198372

Sequences

	Sequence		Length	Mass (Da)
	Q8CRC6 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: 3E5A71EAB682F45B	FASTA	536	60,052
	10 20 30 40 50 60 MSYSIGIDFG TASGRVILAD TSNGHIISRY EEDYANGTYM NSLYDKPLPE NYFLQNADDY 70 80 90 100 110 120 LQILEQGVQF VLEDSKVNKN DVVGIGVDFT SSTIIFLDEQ FEPLHRHEDL KTNPHAYVKL 130 140 150 160 170 180 WKHHGAQDEA NYMIQMSKNK NWLDYYGSSV NSEWMIPKIL EVKHEAPEIL RRARYIMEAG 190 200 210 220 230 240 DYITSILTNS NIRSNCGIGF KGFWDNEAGF NYDFFHSVDP DLPKIVKEKC EAPIISIGES 250 260 270 280 290 300 AGRLCKDYQQ IWGLSQDVQV SPFIIDAHSG VLGVGAIEAG EFTAVIGTST CHLMLDSRQV 310 320 330 340 350 360 PISSITGSVK NAIIPGLYAY EAGQPAVGDL FEYSKNQAPK HIVDQANEHH MPVLNYLEEL 370 380 390 400 410 420 ASHIRIEEQH VVVLDWLNGN RSILSNSHLT GSIFGLTLQT PYEMIHRAYI EATAFGTKLI 430 440 450 460 470 480 MKQFEDNHIP VHTVYASGGI PQKSKLLVEI YANVLNKRVV VIDSSNASAL GAAMLGANVG 490 500 510 520 530 NAYSTLKEAA LSMKQPIAYI QEPEIQKVQA YKPLYHKYCE LHDLLGRQYP ELSYLI

References

[1]

"Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228)." Zhang Y.-Q., Ren S.-X., Li H.-L., Wang Y.-X., Fu G., Yang J., Qin Z.-Q., Miao Y.-G., Wang W.-Y., Chen R.-S., Shen Y., Chen Z., Yuan Z.-H., Zhao G.-P., Qu D., Danchin A., Wen Y.-M. Mol. Microbiol. 49:1577-1593(2003) [PubMed: 12950922] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 12228.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015929 Genomic DNA. Translation: AAO05555.1.
RefSeq	NP_765469.1. NC_004461.1.
3D structure databases
ProteinModelPortal	Q8CRC6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q8CRC6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTAT00000040992; EBSTAP00000039625; EBSTAG00000040990.
GeneID	1055802.
GenomeReviews	Gene locus SE_1914 in contig AE015929_GR.
KEGG	sep:SE1914.
PATRIC	19609704. VBIStaEpi113981_1872.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1069.
GeneTree	EBGT00050000024725.
HOGENOM	HBG312681.
OMA	IMEAGDY.
PhylomeDB	Q8CRC6.
ProtClustDB	PRK04123.
Enzyme and pathway databases
BioCyc	SEPI176280:SE_1914-MONOMER.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ARAB_STAES

Accession

Primary (citable) accession number: Q8CRC6

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 30, 2003
Last sequence update:	March 1, 2003
Last modified:	January 25, 2012
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program