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Q8CN94

- Q8CN94_STAES

UniProt

Q8CN94 - Q8CN94_STAES

Protein
Submitted name:

TcaR transcription regulator

Gene

SE_1937

Organism
Staphylococcus epidermidis (strain ATCC 12228)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. sequence-specific DNA binding transcription factor activity Source: InterPro

    Enzyme and pathway databases

    BioCyciSEPI176280:GCDG-1996-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    TcaR transcription regulatorImported
    Gene namesi
    Ordered Locus Names:SE_1937Imported
    OrganismiStaphylococcus epidermidis (strain ATCC 12228)Imported
    Taxonomic identifieri176280 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000001411: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi176280.SE1937.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4KDPX-ray3.60A/B/C/D/E/F/G1-151[»]
    ProteinModelPortaliQ8CN94.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGibactNOG52672.
    OMAiMKQFIDD.
    OrthoDBiEOG6091DT.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR000835. HTH_MarR-typ.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    SMARTiSM00347. HTH_MARR. 1 hit.
    [Graphical view]
    PROSITEiPS50995. HTH_MARR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8CN94-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVRRIEDHIS FLEKFINDVN TLTAKLLKDL QTEYGISAEQ SHVLNMLSIE    50
    ALTVGQITEK QGVNKAAVSR RVKKLLNAEL VKLEKPDSNT DQRLKIIKLS 100
    NKGKKYIKER KAIMSHIASD MTSDFDSKEI EKVRQVLEII DYRIQSYTSK 150
    L 151
    Length:151
    Mass (Da):17,348
    Last modified:March 1, 2003 - v1
    Checksum:i600536DFEFD5399D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE015929 Genomic DNA. Translation: AAO05578.1.
    RefSeqiNP_765492.1. NC_004461.1.

    Genome annotation databases

    EnsemblBacteriaiAAO05578; AAO05578; SE_1937.
    GeneIDi1055831.
    KEGGisep:SE1937.
    PATRICi19609740. VBIStaEpi113981_1890.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE015929 Genomic DNA. Translation: AAO05578.1 .
    RefSeqi NP_765492.1. NC_004461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4KDP X-ray 3.60 A/B/C/D/E/F/G 1-151 [» ]
    ProteinModelPortali Q8CN94.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 176280.SE1937.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO05578 ; AAO05578 ; SE_1937 .
    GeneIDi 1055831.
    KEGGi sep:SE1937.
    PATRICi 19609740. VBIStaEpi113981_1890.

    Phylogenomic databases

    eggNOGi bactNOG52672.
    OMAi MKQFIDD.
    OrthoDBi EOG6091DT.

    Enzyme and pathway databases

    BioCyci SEPI176280:GCDG-1996-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR000835. HTH_MarR-typ.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    SMARTi SM00347. HTH_MARR. 1 hit.
    [Graphical view ]
    PROSITEi PS50995. HTH_MARR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228)."
      Zhang Y.-Q., Ren S.-X., Li H.-L., Wang Y.-X., Fu G., Yang J., Qin Z.-Q., Miao Y.-G., Wang W.-Y., Chen R.-S., Shen Y., Chen Z., Yuan Z.-H., Zhao G.-P., Qu D., Danchin A., Wen Y.-M.
      Mol. Microbiol. 49:1577-1593(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 12228Imported.
    2. "TcaR-ssDNA complex crystal structure reveals new DNA binding mechanism of the MarR family proteins."
      Chang Y.M., Ho C.H., Chen C.K., Maestre-Reyna M., Chang-Chien M.W., Wang A.H.
      Nucleic Acids Res. 42:5314-5321(2014) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.60 ANGSTROMS).

    Entry informationi

    Entry nameiQ8CN94_STAES
    AccessioniPrimary (citable) accession number: Q8CN94
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3