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Protein
Submitted name:

Uncharacterized protein

Gene

y3288

Organism
Yersinia pestis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. pathogenesis Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:y3288Imported
OrganismiYersinia pestisImported
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000002490: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. outer membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

IntActiQ8CKM1. 2 interactions.
STRINGi187410.y3288.

Structurei

3D structure databases

ProteinModelPortaliQ8CKM1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000266671.
OrthoDBiEOG6SR97V.

Family and domain databases

Gene3Di2.150.10.10. 3 hits.
InterProiIPR008640. Adhesin_Head_dom.
IPR008635. Coiled_stalk_dom.
IPR011049. Serralysin-like_metalloprot_C.
IPR005594. YadA_C.
[Graphical view]
PfamiPF03895. YadA_anchor. 1 hit.
PF05658. YadA_head. 1 hit.
PF05662. YadA_stalk. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8CKM1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGPITSPNCN TPSIGIINTN AGQLFVGGTG AAVSGTLGPT FWTGTFATPV
60 70 80 90 100
GTSNTATAYG MVVQSGGAYI TGNTYVQGGL FLNGQKATNL APATISSTST
110 120 130 140 150
DAVVGSQLYN LVQDGTRYFH ANSVNPTDSL ASGLETIAVG PATVVSGDNG
160 170 180 190 200
VGIGNTALVG AAATGGIAIG FGTQVTAAGA TAIGSAAQAQ GAQSLALGAG
210 220 230 240 250
AVTSQANSIA LGAASINTVG AQSSYSAYAL TAPQASVGEL GIGTALGNRK
260 270 280 290 300
ITGVAAGSAS SDAVNVAQLT AVGDQVQQNT ANITSLGGRV TTIEGSMASI
310 320 330 340 350
ANGGGVKYFH ANSTQPDSVA SGTNSVAIGP ASLASGNAAL ASGAGAVAIG
360 370 380 390 400
DGAAASADGS VAIGQGSGDN GRGVENYIGK YSNASNTSSG TVSVGNTATG
410 420 430 440 450
ETRTVSNVAD GLQATDAVNL RQLDGIAASI VVVENNVSGL QNGTDGMFQV
460 470 480 490 500
NNSSGLAKPS ATGANSATGG AGSVASGNNS TAFGSGAKAT AANSAALGAN
510 520 530 540 550
SVADRANSVS VGSVGNERQI TNVAPATQGT DAVNFDQLKS ISNQTNAYTN
560 570 580 590 600
QRYSELKQDL RKQNSVLSAG IASAMSMASL TQPYTSGSSM TTIGAASYRG
610 620 630 640
QSALSLGVSS ISDSGRWVSK LQASSNTQGD FGIGVGVGYQ W
Length:641
Mass (Da):62,094
Last modified:March 1, 2003 - v1
Checksum:iA5951553FEE45162
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM86837.1.
RefSeqiNP_670586.1. NC_004088.1.

Genome annotation databases

EnsemblBacteriaiAAM86837; AAM86837; y3288.
GeneIDi1148234.
KEGGiypk:y3288.
PATRICi32563301. VBIYerPes65053_3561.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009952 Genomic DNA. Translation: AAM86837.1.
RefSeqiNP_670586.1. NC_004088.1.

3D structure databases

ProteinModelPortaliQ8CKM1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ8CKM1. 2 interactions.
STRINGi187410.y3288.

Protocols and materials databases

DNASUi1148234.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM86837; AAM86837; y3288.
GeneIDi1148234.
KEGGiypk:y3288.
PATRICi32563301. VBIYerPes65053_3561.

Phylogenomic databases

HOGENOMiHOG000266671.
OrthoDBiEOG6SR97V.

Family and domain databases

Gene3Di2.150.10.10. 3 hits.
InterProiIPR008640. Adhesin_Head_dom.
IPR008635. Coiled_stalk_dom.
IPR011049. Serralysin-like_metalloprot_C.
IPR005594. YadA_C.
[Graphical view]
PfamiPF03895. YadA_anchor. 1 hit.
PF05658. YadA_head. 1 hit.
PF05662. YadA_stalk. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIM10+ / Biovar MediaevalisImported.

Entry informationi

Entry nameiQ8CKM1_YERPE
AccessioniPrimary (citable) accession number: Q8CKM1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 7, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.