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Protein
Submitted name:

Putative tetR-family transcriptional regulator

Gene

SCO4940

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative tetR-family transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO4940Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO4940.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HYJX-ray2.19A1-200[»]
ProteinModelPortaliQ8CJS4.
SMRiQ8CJS4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8CJS4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 71HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiCOG1309. LUCA.
HOGENOMiHOG000264381.
InParanoidiQ8CJS4.
OMAiVIREYHT.
OrthoDBiPOG091H03L0.
PhylomeDBiQ8CJS4.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8CJS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPRRSAAEA QATRGRILGR AAEIASEEGL DGITIGRLAE ELEMSKSGVH
60 70 80 90 100
KHFGTKETLQ ISTLDKAFVD FWHRVVEPAL AEPPGLRRLR AVCANSVGYL
110 120 130 140 150
EEPLLPGGCL LTAALSEYDG RPGRVRDAVA EVWSRWREQL RADLTAAVDK
160 170 180 190 200
GELPAGFDVE QALFEIVAAG LALNAAMQLQ HDRTAADRAR RAIERALAQS
Length:200
Mass (Da):21,737
Last modified:March 1, 2003 - v1
Checksum:i7B033B4B22F71423
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939122 Genomic DNA. Translation: CAD55220.1.
RefSeqiNP_733652.1. NC_003888.3.
WP_003974034.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAD55220; CAD55220; CAD55220.
GeneIDi1100381.
KEGGisco:SCO4940.
PATRICi23739720. VBIStrCoe124346_5020.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939122 Genomic DNA. Translation: CAD55220.1.
RefSeqiNP_733652.1. NC_003888.3.
WP_003974034.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HYJX-ray2.19A1-200[»]
ProteinModelPortaliQ8CJS4.
SMRiQ8CJS4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO4940.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD55220; CAD55220; CAD55220.
GeneIDi1100381.
KEGGisco:SCO4940.
PATRICi23739720. VBIStrCoe124346_5020.

Phylogenomic databases

eggNOGiCOG1309. LUCA.
HOGENOMiHOG000264381.
InParanoidiQ8CJS4.
OMAiVIREYHT.
OrthoDBiPOG091H03L0.
PhylomeDBiQ8CJS4.

Miscellaneous databases

EvolutionaryTraceiQ8CJS4.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8CJS4_STRCO
AccessioniPrimary (citable) accession number: Q8CJS4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: November 30, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.