Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

PROP paired-like homeobox 1

Gene

Prop1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi66 – 125HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PROP paired-like homeobox 1Imported
Submitted name:
Pit-1Imported
Gene namesi
Name:Prop1Imported
Synonyms:Prop-1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi628759 Prop1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004872

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini64 – 124HomeoboxInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0490 Eukaryota
ENOG410YIJ3 LUCA
GeneTreeiENSGT00860000133740
HOGENOMiHOG000115706
HOVERGENiHBG053691
KOiK09327
OMAiTCFPHPY
OrthoDBiEOG091G0R1U
TreeFamiTF315976

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q8CJH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAQRRSQQE KQTKGPVCGR SLPESQAASG TLISTVDRSP ETSKRLSGTG
60 70 80 90 100
LGRPKLCPQR GRPHSRRRHR TTFNPAQLGQ LESAFGRNQY PDIWVREGLA
110 120 130 140 150
QDTGLSEARI QVWFQNRRAK QRKQERSLLQ PTAHLSPATF SGFLSESSPY
160 170 180 190 200
PYTYTTPPPP VPCFPHPYNH ALPSQPCTGA SLTLPAQPED WYPTLHPTHT
210 220
GHLACPPPPP MFSLSLETPK SWN
Length:223
Mass (Da):24,881
Last modified:March 1, 2003 - v1
Checksum:iAABC2CCE2F129EA9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC128290 Genomic DNA No translation available.
AB037922 mRNA Translation: BAC20638.1
RefSeqiNP_705891.1, NM_153627.1
XP_008765886.1, XM_008767664.1
UniGeneiRn.86655

Genome annotation databases

EnsembliENSRNOT00000004872; ENSRNOP00000004872; ENSRNOG00000003671
GeneIDi266738
KEGGirno:266738
UCSCiRGD:628759 rat

Similar proteinsi

Entry informationi

Entry nameiQ8CJH7_RAT
AccessioniPrimary (citable) accession number: Q8CJH7
Secondary accession number(s): E9PTF1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: March 28, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported