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Q8CJ20

- Q8CJ20_RAT

UniProt

Q8CJ20 - Q8CJ20_RAT

Protein
Submitted name:

Gap junction channel protein connexin 50

Gene

Gja8

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Biological processi

    1. cell communication Source: InterPro
    2. lens development in camera-type eye Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Gap junction channel protein connexin 50Imported
    Gene namesi
    Name:Gja8Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi628890. Gja8.

    Subcellular locationi

    Cell membrane SAAS annotation; Multi-pass membrane protein SAAS annotation. Cell junctiongap junction SAAS annotation

    GO - Cellular componenti

    1. connexon complex Source: InterPro
    2. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell junction, Cell membraneSAAS annotation, Gap junctionSAAS annotation, Membrane

    Expressioni

    Gene expression databases

    GenevestigatoriQ8CJ20.

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Family and domain databases

    InterProiIPR000500. Connexin.
    IPR019570. Connexin_CCC.
    IPR017990. Connexin_CS.
    [Graphical view]
    PANTHERiPTHR11984. PTHR11984. 1 hit.
    PfamiPF10582. Connexin_CCC. 1 hit.
    [Graphical view]
    PRINTSiPR00206. CONNEXIN.
    SMARTiSM01089. Connexin_CCC. 1 hit.
    [Graphical view]
    PROSITEiPS00408. CONNEXINS_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q8CJ20-1 [UniParc]FASTAAdd to Basket

    « Hide

    LFEVGFIVGH YFLYGFRILP LYRCSRWPCP NVVDCFVSRP TEKTIFILFM    50
    LSVAFVSLFL NIMEMSHLGM KGIRSAFKRP AEQPLGEIAE KSLHSIAVSS 100
    Length:100
    Mass (Da):11,404
    Last modified:March 1, 2003 - v1
    Checksum:i768EC7FE15CB02A6
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported
    Non-terminal residuei100 – 1001Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF536560 mRNA. Translation: AAN17803.1.
    UniGeneiRn.86658.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF536560 mRNA. Translation: AAN17803.1 .
    UniGenei Rn.86658.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    RGDi 628890. Gja8.

    Gene expression databases

    Genevestigatori Q8CJ20.

    Family and domain databases

    InterProi IPR000500. Connexin.
    IPR019570. Connexin_CCC.
    IPR017990. Connexin_CS.
    [Graphical view ]
    PANTHERi PTHR11984. PTHR11984. 1 hit.
    Pfami PF10582. Connexin_CCC. 1 hit.
    [Graphical view ]
    PRINTSi PR00206. CONNEXIN.
    SMARTi SM01089. Connexin_CCC. 1 hit.
    [Graphical view ]
    PROSITEi PS00408. CONNEXINS_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The detection of hamster connexins: a comparison of expression profiles with wild-type mouse and the cancer-prone min mouse."
      Cruciani V., Heintz K.M., Husoy T., Hovig E., Warren D.J., Mikalsen S.O.
      Cell Commun. Adhes. 11:155-171(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiQ8CJ20_RAT
    AccessioniPrimary (citable) accession number: Q8CJ20
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)