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Protein
Submitted name:

Transcription factor YY1

Gene

Yy1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-RNO-5689603 UCH proteinases
R-RNO-5696394 DNA Damage Recognition in GG-NER
R-RNO-9018519 Estrogen-dependent gene expression

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor YY1Imported
Submitted name:
YY1 transcription factorImported
Gene namesi
Name:Yy1Imported
Synonyms:yy1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi3982 Yy1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ8CHJ4

Expressioni

Gene expression databases

BgeeiENSRNOG00000004339

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ8CHJ4, 2 interactors
STRINGi10116.ENSRNOP00000005743

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini293 – 317C2H2-typeInterPro annotationAdd BLAST25
Domaini322 – 349C2H2-typeInterPro annotationAdd BLAST28
Domaini350 – 379C2H2-typeInterPro annotationAdd BLAST30
Domaini380 – 409C2H2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144128
HOGENOMiHOG000008232
HOVERGENiHBG006823
KOiK09201
OMAiGGRKWEQ
OrthoDBiEOG091G03FM
TreeFamiTF106493

Family and domain databases

InterProiView protein in InterPro
IPR017114 YY-1-like
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PIRSFiPIRSF037113 TF_Yin_yang, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequencei

Sequence statusi: Complete.

Q8CHJ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASGDTLYIA TDGSEMPAEI VELHEIEVET IPVETIETTV VGEEEDDDED
60 70 80 90 100
DEDGGGGDHG GGGGHGHAGH HHHHHHHHHP PMIALQPLVT DDPTQVHHHQ
110 120 130 140 150
EVILVQTREE VVGGDDSDGL RAEDGFEDQI LIPVPAPAGG DDDYIEQTLV
160 170 180 190 200
TVAAAGKSGG GSSSGGGRVK KGGGKKSGKK SYLGSGAGAA GGGGADPGNK
210 220 230 240 250
KWEQKQVQIK TLEGEFSVTM WSSDEKKDID HETVVEEQII GENSPPDYSE
260 270 280 290 300
YMTGKKLPPG GIPGIDLSDP KQLAEFARMK PRKIKEDDAP RTIACPHKGC
310 320 330 340 350
TKMFRDNSAM RKHLHTHGPR VHVCAECGKA FVESSKLKRH QLVHTGEKPF
360 370 380 390 400
QCTFEGCGKR FSLDFNLRTH VRIHTGDRPY VCPFDGCNKK FAQSTNLKSH
410
ILTHAKAKNN Q
Length:411
Mass (Da):44,417
Last modified:March 1, 2003 - v1
Checksum:i09EDA4A54449FF8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07065506 Genomic DNA No translation available.
AY442180 Genomic DNA Translation: AAR14688.1
AB080317 mRNA Translation: BAC53761.1
RefSeqiNP_775412.1, NM_173290.1
UniGeneiRn.162877

Genome annotation databases

EnsembliENSRNOT00000005743; ENSRNOP00000005743; ENSRNOG00000004339
GeneIDi24919
KEGGirno:24919
UCSCiRGD:3982 rat

Similar proteinsi

Entry informationi

Entry nameiQ8CHJ4_RAT
AccessioniPrimary (citable) accession number: Q8CHJ4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 23, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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