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Unreviewed, UniProtKB/TrEMBL Q8CHD5 (Q8CHD5_MOUSE)

Last modified January 19, 2010. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    MKIAA0696 protein EMBL BAC41444.1
Gene names
Name: Fbxw11 MGI 2144023
Synonyms: Fbxw1b MGI 2144023, mKIAA0696 EMBL BAC41444.1
OrganismMus musculus (Mouse) EMBL BAC41444.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

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Protein attributes

Sequence length555 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Contains 1 F-box domain.

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Ontologies

Keywords
   DomainRepeat RuleBase RU003532V3
WD repeat RuleBase RU000362V4
Gene Ontology (GO)
None. [Check GOA]

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAC41444.1

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Sequences

Sequence LengthMass (Da)Tools
Q8CHD5-1 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 6025496DBAC6A489

FASTA55563,288
        10         20         30         40         50         60 
AELRAARAGW QLEWVRELPP PPPPPPPPPP GPIAAERRER GGAAGAAMEP DSVIEDKTIE 

        70         80         90        100        110        120 
LMISNGTSSV IVSRKRPSEG NYQKEKDLCI KYFDQWSESD QVEFVEHLIS RMCHYQHGHI 

       130        140        150        160        170        180 
NSYLKPMLQR DFITALPEQG LDHIAENILS YLDARSLCAA ELVCKEWQRV ISEGMLWKKL 

       190        200        210        220        230        240 
IERMVRTDPL WKGLSERRGW DQYLFKNRPT DGPPNSFYRS LYPKIIQDIE TIESNWRCGR 

       250        260        270        280        290        300 
HNLQRIQCRS ENSKGVYCLQ YDDDKIISGL RDNSIKIWDK SSLECLKVLT GHTGSVLCLQ 

       310        320        330        340        350        360 
YDERVIVTGS SDSTVRVWDV NTGEVLNTLI HHNEAVLHLR FSNGLMVTCS KDRSIAVWDM 

       370        380        390        400        410        420 
ASATDITLRR VLVGHRAAVN VVDFDDKYIV SASGDRTIKV WSTSTCEFVR TLNGHKRGIA 

       430        440        450        460        470        480 
CLQYRDRLVV SGSSDNTIRL WDIECGACLR VLEGHEELVR CIRFDNKRIV SGAYDGKIKV 

       490        500        510        520        530        540 
WDLQAALDPR APASTLCLRT LVEHSGRVFR LQFDEFQIIS SSHDDTILIW DFLNVPPSAQ 

       550 
NETRSPSRTY TYISR

« Hide

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References

[1]"Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
Okazaki N., Kikuno R., Ohara R., Inamoto S., Hara Y., Nagase T., Ohara O., Koga H.
Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL BAC41444.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB093260 mRNA. Translation: BAC41444.1.
IPIIPI00474016.
UniGeneMm.28017

3D structure databases

HSSPHSSP built from PDB template 1P22 based on UniProtKB Q9Y297.
SMRQ8CHD5. Positions 80-129, 127-531.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8CHD5.

Genome annotation databases

EnsemblENSMUST00000082313; ENSMUSP00000080930; ENSMUSG00000020271; Mus musculus. [Genome view]

Organism-specific databases

MGIMGI:2144023. Fbxw11.

Phylogenomic databases

HOVERGENQ8CHD5.
PhylomeDBQ8CHD5.

Gene expression databases

ArrayExpressQ8CHD5.
BgeeQ8CHD5.
GenevestigatorQ8CHD5.

Family and domain databases

InterProIPR001810. F-box.
IPR020472. G-protein_beta_WD-40_rep_reg.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR011046. WD40_repeat-like_dom.
IPR019782. WD40_repeat_2.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
IPR019781. WD40_repeat_sg.
[Graphical view]
Gene3DG3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
PfamPF00646. F-box. 1 hit.
PF00400. WD40. 7 hits.
[Graphical view]
PRINTSPR00320. GPROTEINBRPT.
SMARTSM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
PROSITEPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 5 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

SOURCESearch...

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Entry information

Entry nameQ8CHD5_MOUSE
AccessionPrimary (citable) accession number: Q8CHD5
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 19, 2010
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information