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Q8CH18

- CCAR1_MOUSE

UniProt

Q8CH18 - CCAR1_MOUSE

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Protein

Cell division cycle and apoptosis regulator protein 1

Gene
Ccar1, Carp1
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Associates with components of the Mediator and p160 coactivator complexes that play a role as intermediaries transducing regulatory signals from upstream transcriptional activator proteins to basal transcription machinery at the core promoter. Recruited to endogenous nuclear receptor target genes in response to the appropriate hormone. Also functions as a p53 coactivator. May thus play an important role in transcriptional regulation. May be involved in apoptosis signaling in the presence of the retinoid CD437. Apoptosis induction involves sequestration of 14-3-3 protein(s) and mediated altered expression of multiple cell cycle regulatory genes including MYC, CCNB1 and CDKN1A. Plays a role in cell cycle progression and/or cell proliferation By similarity.1 Publication

GO - Molecular functioni

  1. ligand-dependent nuclear receptor transcription coactivator activity Source: Ensembl
  2. nucleic acid binding Source: InterPro

GO - Biological processi

  1. apoptotic process Source: UniProtKB-KW
  2. cell cycle Source: UniProtKB-KW
  3. regulation of transcription, DNA-templated Source: UniProtKB-KW
  4. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Apoptosis, Cell cycle, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Cell division cycle and apoptosis regulator protein 1
Alternative name(s):
Cell cycle and apoptosis regulatory protein 1
Short name:
CARP-1
Gene namesi
Name:Ccar1
Synonyms:Carp1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 10

Organism-specific databases

MGIiMGI:1914750. Ccar1.

Subcellular locationi

Cytoplasmperinuclear region By similarity

GO - Cellular componenti

  1. perinuclear region of cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11461146Cell division cycle and apoptosis regulator protein 1PRO_0000233149Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Cross-linki634 – 634Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) By similarity
Modified residuei682 – 6821Phosphoserine By similarity
Modified residuei694 – 6941Phosphoserine By similarity
Modified residuei858 – 8581Phosphothreonine By similarity

Keywords - PTMi

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

MaxQBiQ8CH18.
PaxDbiQ8CH18.
PRIDEiQ8CH18.

PTM databases

PhosphoSiteiQ8CH18.

Expressioni

Gene expression databases

BgeeiQ8CH18.
CleanExiMM_CCAR1.
GenevestigatoriQ8CH18.

Interactioni

Subunit structurei

Directly interacts with CALCOCO1, ESR1, NR3C1 and TP53.1 Publication

Protein-protein interaction databases

BioGridi212231. 6 interactions.
IntActiQ8CH18. 3 interactions.
MINTiMINT-1550931.

Structurei

3D structure databases

ProteinModelPortaliQ8CH18.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini633 – 66735SAPAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili591 – 61525 Reviewed predictionAdd
BLAST
Coiled coili1029 – 111082 Reviewed predictionAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi3 – 287285Gln-richAdd
BLAST
Compositional biasi290 – 35869Arg-richAdd
BLAST
Compositional biasi670 – 886217Glu-richAdd
BLAST

Sequence similaritiesi

Contains 1 SAP domain.

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG313311.
GeneTreeiENSGT00530000063672.
HOVERGENiHBG079908.
InParanoidiQ05BR1.
OMAiELYHKSC.
OrthoDBiEOG7CK365.
PhylomeDBiQ8CH18.
TreeFamiTF316387.

Family and domain databases

Gene3Di1.10.720.30. 1 hit.
InterProiIPR025224. DBC1/CARP1.
IPR025954. DBC1/CARP1_inactive_NUDIX_dom.
IPR025223. S1-like_RNA-bd_dom.
IPR003034. SAP_dom.
[Graphical view]
PANTHERiPTHR14304. PTHR14304. 1 hit.
PfamiPF14443. DBC1. 1 hit.
PF14444. S1-like. 1 hit.
PF02037. SAP. 1 hit.
[Graphical view]
SMARTiSM00513. SAP. 1 hit.
[Graphical view]
PROSITEiPS50800. SAP. 1 hit.
[Graphical view]

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q8CH18-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MAQFGGQKNP PWATQFTATA VSQPAALGVQ QPSLLGASPT IYTQQTALAA     50
AGLTTQTPAN YQLTQTAALQ QQAAAVLQQQ YSQPQQALYS VQQQLQQPQQ 100
TILTQPAVAL PTSLSLSTPQ PAAQITVSYP TPRSSQQQTQ PQKQRVFTGV 150
VTKLHDTFGF VDEDVFFQLG AVKGKTPQVG DRVLVEATYN PNMPFKWNAQ 200
RIQTLPNQNQ SQTQPLLKTP TAVIQPIVPQ TTFGVQAQPQ PQSLLQAQIS 250
AASITPLLQT QPQPLLQQPQ QKAGLLQPPV RIVSQPQPAR RLDPPSRFSG 300
RNDRGDQVPN RKDDRSRERD RERRRSRERS PQRKRSRERS PRRERERSPR 350
RVRRVVPRYT VQFSKFSLDC PSCDMMELRR RYQNLYIPSD FFDAQFTWVD 400
AFPLSRPFQL GNYCNFYVMH REVESLEKNM AVLDPPDADH LYSAKVMLMA 450
SPSMEDLYHK SCALAEDPQD LRDGFQHPAR LVKFLVGMKG KDEAMAIGGH 500
WSPSLDGPNP EKDPSVLIKT AIRCCKALTG IDLSVCTQWY RFAEIRYHRP 550
EETHKGRTVP AHVETVVLFF PDVWHCLPTR SEWETLSRGY KQQLVEKLQG 600
ERKKADGEQD EEEKDDGEVK EIATPTHWSK LDPKAMKVND LRKELESRAL 650
SSKGLKSQLI ARLTKQLKIE EQKEEQKELE KSEKEEEDED DKKSEDDKEE 700
EERKRQEEVE RQRQERRYIL PDEPAIIVHP NWAAKSGKFD CSIMSLSVLL 750
DYRLEDNKEH SFEVSLFAEL FNEMLQRDFG VRIYKSLLSL PEKEDKKDKE 800
KKSKKEERKD KKEEREDDID EPKPKRRKSG DDKDKKEDRD ERKKEEKRKD 850
DSKDDDETEE DNNQDEYDPM EAEEAEDEDD DREEEEVKRD DKRDVSRYCK 900
DRPAKDKEKE KPQMVTVNRD LLMAFVYFDQ SHCGYLLEKD LEEILYTLGL 950
HLSRAQVKKL LNKVVLRESC FYRKLTDTSK DDENHEESEA LQEDMLGNRL 1000
LLPTPTIKQE SKDGEENVGL IVYNGAMVDV GSLLQKLEKS EKVRAEVEQK 1050
LQLLEEKTDE DGKTILNLEN SNKSLSGELR EVKKDLGQLQ ENLEVSENMN 1100
LQFENQLNKT LRNLSTVMDD IHTVLKKDNV KSEDRDEKSK ENGSGV 1146
Length:1,146
Mass (Da):132,060
Last modified:March 1, 2003 - v1
Checksum:i6005A057B4F0BFF0
GO
Isoform 2 (identifier: Q8CH18-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     316-327: SRERDRERRRSR → RYVLRQCGGLEK
     328-1146: Missing.

Note: No experimental confirmation available.

Show »
Length:327
Mass (Da):35,718
Checksum:i42FF713BD7603559
GO
Isoform 3 (identifier: Q8CH18-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     638-699: Missing.

Note: No experimental confirmation available.

Show »
Length:1,084
Mass (Da):124,746
Checksum:iAB6C39FC58378B7C
GO

Sequence cautioni

The sequence AAH10199.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.
The sequence AAH34174.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.
The sequence AAH39939.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.
The sequence AAH51052.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.
The sequence AAH60130.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.
The sequence AAH79652.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei316 – 32712SRERD…RRRSR → RYVLRQCGGLEK in isoform 2. VSP_018054Add
BLAST
Alternative sequencei328 – 1146819Missing in isoform 2. VSP_018055Add
BLAST
Alternative sequencei638 – 69962Missing in isoform 3. VSP_037737Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti279 – 2791P → L in AAH79652. 1 Publication
Sequence conflicti558 – 5581T → A in AAH39939. 1 Publication
Sequence conflicti802 – 8021K → E in BAC37267. 1 Publication
Sequence conflicti821 – 8211E → G in BAC37267. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF465615 mRNA. Translation: AAO17318.1.
AK012111 mRNA. Translation: BAB28040.2.
AK077151 mRNA. Translation: BAC36646.1.
AK078424 mRNA. Translation: BAC37267.1.
BC010199 mRNA. Translation: AAH10199.1. Sequence problems.
BC034174 mRNA. Translation: AAH34174.1. Sequence problems.
BC039939 mRNA. Translation: AAH39939.1. Sequence problems.
BC051052 mRNA. Translation: AAH51052.1. Sequence problems.
BC060130 mRNA. Translation: AAH60130.1. Sequence problems.
BC079652 mRNA. Translation: AAH79652.1. Sequence problems.
CCDSiCCDS35922.1. [Q8CH18-1]
RefSeqiNP_080477.1. NM_026201.3. [Q8CH18-1]
XP_006514057.1. XM_006513994.1. [Q8CH18-1]
XP_006514058.1. XM_006513995.1. [Q8CH18-1]
XP_006514059.1. XM_006513996.1. [Q8CH18-1]
XP_006514060.1. XM_006513997.1. [Q8CH18-3]
UniGeneiMm.196371.

Genome annotation databases

EnsembliENSMUST00000020268; ENSMUSP00000020268; ENSMUSG00000020074. [Q8CH18-1]
GeneIDi67500.
KEGGimmu:67500.
UCSCiuc007fja.2. mouse. [Q8CH18-1]
uc007fjc.2. mouse. [Q8CH18-2]
uc011xff.1. mouse. [Q8CH18-3]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF465615 mRNA. Translation: AAO17318.1 .
AK012111 mRNA. Translation: BAB28040.2 .
AK077151 mRNA. Translation: BAC36646.1 .
AK078424 mRNA. Translation: BAC37267.1 .
BC010199 mRNA. Translation: AAH10199.1 . Sequence problems.
BC034174 mRNA. Translation: AAH34174.1 . Sequence problems.
BC039939 mRNA. Translation: AAH39939.1 . Sequence problems.
BC051052 mRNA. Translation: AAH51052.1 . Sequence problems.
BC060130 mRNA. Translation: AAH60130.1 . Sequence problems.
BC079652 mRNA. Translation: AAH79652.1 . Sequence problems.
CCDSi CCDS35922.1. [Q8CH18-1 ]
RefSeqi NP_080477.1. NM_026201.3. [Q8CH18-1 ]
XP_006514057.1. XM_006513994.1. [Q8CH18-1 ]
XP_006514058.1. XM_006513995.1. [Q8CH18-1 ]
XP_006514059.1. XM_006513996.1. [Q8CH18-1 ]
XP_006514060.1. XM_006513997.1. [Q8CH18-3 ]
UniGenei Mm.196371.

3D structure databases

ProteinModelPortali Q8CH18.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 212231. 6 interactions.
IntActi Q8CH18. 3 interactions.
MINTi MINT-1550931.

PTM databases

PhosphoSitei Q8CH18.

Proteomic databases

MaxQBi Q8CH18.
PaxDbi Q8CH18.
PRIDEi Q8CH18.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000020268 ; ENSMUSP00000020268 ; ENSMUSG00000020074 . [Q8CH18-1 ]
GeneIDi 67500.
KEGGi mmu:67500.
UCSCi uc007fja.2. mouse. [Q8CH18-1 ]
uc007fjc.2. mouse. [Q8CH18-2 ]
uc011xff.1. mouse. [Q8CH18-3 ]

Organism-specific databases

CTDi 55749.
MGIi MGI:1914750. Ccar1.

Phylogenomic databases

eggNOGi NOG313311.
GeneTreei ENSGT00530000063672.
HOVERGENi HBG079908.
InParanoidi Q05BR1.
OMAi ELYHKSC.
OrthoDBi EOG7CK365.
PhylomeDBi Q8CH18.
TreeFami TF316387.

Miscellaneous databases

ChiTaRSi CCAR1. mouse.
NextBioi 324750.
PROi Q8CH18.
SOURCEi Search...

Gene expression databases

Bgeei Q8CH18.
CleanExi MM_CCAR1.
Genevestigatori Q8CH18.

Family and domain databases

Gene3Di 1.10.720.30. 1 hit.
InterProi IPR025224. DBC1/CARP1.
IPR025954. DBC1/CARP1_inactive_NUDIX_dom.
IPR025223. S1-like_RNA-bd_dom.
IPR003034. SAP_dom.
[Graphical view ]
PANTHERi PTHR14304. PTHR14304. 1 hit.
Pfami PF14443. DBC1. 1 hit.
PF14444. S1-like. 1 hit.
PF02037. SAP. 1 hit.
[Graphical view ]
SMARTi SM00513. SAP. 1 hit.
[Graphical view ]
PROSITEi PS50800. SAP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "TAZ binding partners identified by mass spectrometry."
    Tian Y., Li D., Benjamin T.
    Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
    Strain: Swiss Webster.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Strain: C57BL/6J.
    Tissue: Embryo, Testis and Wolffian duct.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-833 (ISOFORM 1), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-797 (ISOFORM 3).
    Strain: C57BL/6, Czech II and FVB/N.
    Tissue: Brain, Kidney and Mammary tumor.
  4. "CCAR1, a key regulator of mediator complex recruitment to nuclear receptor transcription complexes."
    Kim J.H., Yang C.K., Heo K., Roeder R.G., An W., Stallcup M.R.
    Mol. Cell 31:510-519(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, INTERACTION WITH CALCOCO1; ESR1 AND NR3C.

Entry informationi

Entry nameiCCAR1_MOUSE
AccessioniPrimary (citable) accession number: Q8CH18
Secondary accession number(s): Q05BR1
, Q05DK6, Q6AXC9, Q6PAR2, Q80XE4, Q8BJY0, Q8BVN2, Q8CGG1, Q9CSR5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 2, 2006
Last sequence update: March 1, 2003
Last modified: September 3, 2014
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi