Q8CGJ7 (Q8CGJ7_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ift74 protein EMBL AAH23760.1

Gene names

Name:	Ift74 MGI 1914944
Synonyms:	Ccdc2 MGI 1914944

Organism

Mus musculus (Mouse) EMBL AAH23760.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	333 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	positive regulation of cell adhesion mediated by integrin Inferred from mutant phenotype PubMed 20545763. Source: MGI positive regulation of transcription from RNA polymerase II promoter Inferred from direct assay PubMed 20545763. Source: MGI
Cellular_component	nucleus Inferred from direct assay PubMed 16705683PubMed 20545763. Source: MGI
Molecular_function	chromatin binding Inferred from direct assay PubMed 20545763. Source: MGI
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	333	1	EMBL AAH23760.1

Sequences

	Sequence		Length	Mass (Da)
	Q8CGJ7 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: C63E53CF71927255	FASTA	333	37,715
	10 20 30 40 50 60 MASNHKSSAP RPISRGGIGL TGRPPSGIRP PSGNVRVATA MPPTTARPGS RGGPLGTGGV 70 80 90 100 110 120 LSSQIKVADR PVTQQGLSGM KTGMKGPQRQ ILDKSYYLGL LRSKISELTT EINKLQKEIE 130 140 150 160 170 180 MYNQENSVYL SYEKRAETLA VEIKDFQGQL ADYNMLVDKL NTNTEMEEVM SDYNMLKAQN 190 200 210 220 230 240 DRETQSMDVI FTERQAKEKQ IRSVEEEVEQ EKQAADGIIK NMSPEKQVKY IEMKTTNEKL 250 260 270 280 290 300 LQELDTLQQQ LDSLNMKKES LETEIAHSQV KQEAVLLYEK LYELESHRDQ MIAEDKSMGS 310 320 330 PMEERERLLK QVKEDNQEIA SMERQLTDIK KKK

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: FVB/N EMBL AAH23760.1. Tissue: Mammary tumor. C3 EMBL AAH23760.1.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC023760 mRNA. Translation: AAH23760.1.
IPI	IPI00650060.
UniGene	Mm.240619.
3D structure databases
ProteinModelPortal	Q8CGJ7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
MGI	MGI:1914944. Ift74.
Phylogenomic databases
HOVERGEN	HBG050820.
InParanoid	Q8CGJ7.
Gene expression databases
Genevestigator	Q8CGJ7.
Family and domain databases
ProtoNet	Search...
Other
SOURCE	Search...

Entry information

Entry name

Q8CGJ7_MOUSE

Accession

Primary (citable) accession number: Q8CGJ7

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	April 3, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)