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Protein

Protein FAM149A

Gene

Fam149a

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM149A
Gene namesi
Name:Fam149a
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 8

Organism-specific databases

MGIiMGI:2387177. Fam149a.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 787787Protein FAM149APRO_0000319931Add
BLAST

Proteomic databases

PRIDEiQ8CFV2.

PTM databases

PhosphoSiteiQ8CFV2.

Expressioni

Gene expression databases

BgeeiQ8CFV2.
ExpressionAtlasiQ8CFV2. baseline and differential.
GenevisibleiQ8CFV2. MM.

Structurei

3D structure databases

ProteinModelPortaliQ8CFV2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi239 – 28143Ser-richAdd
BLAST

Sequence similaritiesi

Belongs to the FAM149 family.Curated

Phylogenomic databases

eggNOGiNOG27759.
GeneTreeiENSGT00530000063727.
HOGENOMiHOG000112437.
HOVERGENiHBG107111.
InParanoidiQ8CFV2.
PhylomeDBiQ8CFV2.
TreeFamiTF330725.

Family and domain databases

InterProiIPR022194. DUF3719.
[Graphical view]
PfamiPF12516. DUF3719. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8CFV2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVAVLDLGS LFAKIFKLST ASPAVSSHPG GAAATGSVDS GASTSLREAE
60 70 80 90 100
TLTLLPSLPP DTAASREPFT PVHTPLPASH PRSSAAAQRV EATGCSGSLP
110 120 130 140 150
SSSGASIAPP LTPYSGSAGS VASVTLPSPG VDWATLPSVT IPLGSNSVTA
160 170 180 190 200
SSPRNPRQLR APGEREPSVW MAPGPVPKTL FFTLPDIGEE WTSDSDSQDD
210 220 230 240 250
PEGRGLSEGL RKQSSEKSKD PLPTNFTRNV QKAIDKFASE SPSSFSSSGS
260 270 280 290 300
RTPTEAHNSW PGSSTQSSTT GLSTERSSVS SWRDDEFDKV SAQKVHQLFW
310 320 330 340 350
EVEELLFEGK VSPQTQNLLA ECSEWARRSL HLRVVGRQLV PPTDEGFQHF
360 370 380 390 400
QGSLPSSATH EALPHVPDHT SSSRELCISG SQIVPEVHSA SALTDPDGTE
410 420 430 440 450
SADLTSCSSL KEEVYHVDGN IEEYFAFDRK QDGDEHLGQS PALRGRKRHR
460 470 480 490 500
HGLPPISPDD CIRDAVAAEV FDHVWTNVVE ILEDLIRKTW ESALTGGKKH
510 520 530 540 550
KEKLKVAENR SPHVLMSRLS TDVCSVPPSR SSDTLQPSLA PHFNPPQFPQ
560 570 580 590 600
LHRFSSNFYS DLSGVMTIQA KPLQQRPTYS ADRTQNDQDD KLPGGGVGAS
610 620 630 640 650
SRHRLGRILD ARGPQTSVKK TPVHRRLPSI ASDPQRLKTP TVYSDEILRG
660 670 680 690 700
TKLQTGIDYL PSPAAVQTSR SRLPPIGSET GEPNTAASGS RPVSYRGRHP
710 720 730 740 750
QSRVFSAMPD SIERSPLRER TIVLEQLSRP STTHTFRSDT PRKGSLTPVE
760 770 780
FVAHTWTGQS ILTGSQYLPK SYQRATLTAR KRFQVAS
Length:787
Mass (Da):85,100
Last modified:March 1, 2003 - v1
Checksum:i38CF9164C51D4EBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK140440 mRNA. Translation: BAE24387.1.
AK141607 mRNA. Translation: BAE24761.1.
BC035537 mRNA. Translation: AAH35537.1.
CCDSiCCDS22277.1.
RefSeqiNP_705763.1. NM_153535.2.
UniGeneiMm.51259.

Genome annotation databases

EnsembliENSMUST00000093526; ENSMUSP00000091245; ENSMUSG00000070044.
GeneIDi212326.
KEGGimmu:212326.
UCSCiuc009lox.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK140440 mRNA. Translation: BAE24387.1.
AK141607 mRNA. Translation: BAE24761.1.
BC035537 mRNA. Translation: AAH35537.1.
CCDSiCCDS22277.1.
RefSeqiNP_705763.1. NM_153535.2.
UniGeneiMm.51259.

3D structure databases

ProteinModelPortaliQ8CFV2.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiQ8CFV2.

Proteomic databases

PRIDEiQ8CFV2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000093526; ENSMUSP00000091245; ENSMUSG00000070044.
GeneIDi212326.
KEGGimmu:212326.
UCSCiuc009lox.1. mouse.

Organism-specific databases

CTDi25854.
MGIiMGI:2387177. Fam149a.

Phylogenomic databases

eggNOGiNOG27759.
GeneTreeiENSGT00530000063727.
HOGENOMiHOG000112437.
HOVERGENiHBG107111.
InParanoidiQ8CFV2.
PhylomeDBiQ8CFV2.
TreeFamiTF330725.

Miscellaneous databases

ChiTaRSiFam149a. mouse.
NextBioi373535.
PROiQ8CFV2.
SOURCEiSearch...

Gene expression databases

BgeeiQ8CFV2.
ExpressionAtlasiQ8CFV2. baseline and differential.
GenevisibleiQ8CFV2. MM.

Family and domain databases

InterProiIPR022194. DUF3719.
[Graphical view]
PfamiPF12516. DUF3719. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Hippocampus and Medulla oblongata.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Eye.

Entry informationi

Entry nameiF149A_MOUSE
AccessioniPrimary (citable) accession number: Q8CFV2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: March 1, 2003
Last modified: June 24, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.