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Q8CEG8

- UBP27_MOUSE

UniProt

Q8CEG8 - UBP27_MOUSE

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Protein
Ubiquitin carboxyl-terminal hydrolase 27
Gene
Usp27, Usp27x
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei87 – 871Nucleophile By similarity
Active sitei380 – 3801Proton acceptor By similarity

GO - Molecular functioni

  1. cysteine-type peptidase activity Source: UniProtKB-KW
  2. ubiquitinyl hydrolase activity Source: InterPro

GO - Biological processi

  1. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Thiol protease

Keywords - Biological processi

Ubl conjugation pathway

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquitin carboxyl-terminal hydrolase 27 (EC:3.4.19.12)
Alternative name(s):
Deubiquitinating enzyme 27
Ubiquitin thioesterase 27
Ubiquitin-specific-processing protease 27
X-linked ubiquitin carboxyl-terminal hydrolase 27
Gene namesi
Name:Usp27
Synonyms:Usp27x
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:1859645. Usp27x.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 438438Ubiquitin carboxyl-terminal hydrolase 27
PRO_0000367515Add
BLAST

Proteomic databases

PRIDEiQ8CEG8.

PTM databases

PhosphoSiteiQ8CEG8.

Expressioni

Gene expression databases

BgeeiQ8CEG8.
GenevestigatoriQ8CEG8.

Structurei

3D structure databases

ProteinModelPortaliQ8CEG8.
SMRiQ8CEG8. Positions 76-418.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini78 – 421344USP
Add
BLAST

Sequence similaritiesi

Belongs to the peptidase C19 family.
Contains 1 USP domain.

Phylogenomic databases

eggNOGiCOG5533.
GeneTreeiENSGT00750000117288.
HOVERGENiHBG058014.
InParanoidiQ9JIG5.
KOiK11366.
OMAiTEKHIHE.
OrthoDBiEOG7FR7G7.
TreeFamiTF323554.

Family and domain databases

InterProiIPR018200. Pept_C19ubi-hydrolase_C_CS.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view]
PfamiPF00443. UCH. 1 hit.
[Graphical view]
PROSITEiPS00972. USP_1. 1 hit.
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8CEG8-1 [UniParc]FASTAAdd to Basket

« Hide

MCKDYVYDID IEQIAKEEQG EALKLQASTS TEVSQQQCSV PGLGEKYPTW    50
ETTKPELELL GHNPRRRRIA SSFTIGLRGL INLGNTCFMN CIVQALTHTP 100
ILRDFFLSDR HRCEMPSPEL CLVCEMSSLF RELYSGNPSP HVPYKLLHLV 150
WIHARHLAGY RQQDAHEFLI AALDVLHRHC KGDDVGKVAS NPNHCNCIID 200
QIFTGGLQSD VTCQACHGVS TTIDPCWDIS LDLPGSCTSF WPMSPGRESS 250
LNGESHIPGI TTLTDCLRRF TRPEHLGSSA KIKCGSCQSY QESTKQLTMK 300
KLPVVACFHF KRFEHSAKQR RKITTYISFP LELDMTPFMA SSKETRVNGQ 350
LQLPTNSANN ENKYSLFAVV NHQGTLESGH YTSFIRHHRD QWFKCDDAVI 400
TKASIKDVLD SEGYLLFYHK QVLEPEPEKV KEMTPQAY 438
Length:438
Mass (Da):49,599
Last modified:March 24, 2009 - v2
Checksum:i159B156E0E00FEB9
GO

Sequence cautioni

The sequence BAC25840.1 differs from that shown. Reason: Frameshift at position 369.
The sequence AAF66953.1 differs from that shown. Reason: Erroneous initiation.
The sequence BAC25840.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.
The sequence BAC26935.1 differs from that shown. Reason: Erroneous initiation.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti74 – 741T → A in AAF66953. 1 Publication
Sequence conflicti192 – 1921P → H in AAF66953. 1 Publication
Sequence conflicti251 – 2522LN → VD in AAF66953. 1 Publication
Sequence conflicti324 – 3241T → A in AAF66953. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF229643 mRNA. Translation: AAF66953.1. Different initiation.
AK028249 mRNA. Translation: BAC25840.1. Sequence problems.
AK030383 mRNA. Translation: BAC26935.1. Different initiation.
AL663104 Genomic DNA. Translation: CAM17475.1.
CCDSiCCDS52983.1.
RefSeqiNP_062334.2. NM_019461.4.
UniGeneiMm.483107.
Mm.491689.

Genome annotation databases

EnsembliENSMUST00000115744; ENSMUSP00000111409; ENSMUSG00000046269.
ENSMUST00000178293; ENSMUSP00000137509; ENSMUSG00000046269.
GeneIDi54651.
KEGGimmu:54651.
UCSCiuc012hee.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF229643 mRNA. Translation: AAF66953.1 . Different initiation.
AK028249 mRNA. Translation: BAC25840.1 . Sequence problems.
AK030383 mRNA. Translation: BAC26935.1 . Different initiation.
AL663104 Genomic DNA. Translation: CAM17475.1 .
CCDSi CCDS52983.1.
RefSeqi NP_062334.2. NM_019461.4.
UniGenei Mm.483107.
Mm.491689.

3D structure databases

ProteinModelPortali Q8CEG8.
SMRi Q8CEG8. Positions 76-418.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q8CEG8.

Proteomic databases

PRIDEi Q8CEG8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000115744 ; ENSMUSP00000111409 ; ENSMUSG00000046269 .
ENSMUST00000178293 ; ENSMUSP00000137509 ; ENSMUSG00000046269 .
GeneIDi 54651.
KEGGi mmu:54651.
UCSCi uc012hee.1. mouse.

Organism-specific databases

CTDi 389856.
MGIi MGI:1859645. Usp27x.

Phylogenomic databases

eggNOGi COG5533.
GeneTreei ENSGT00750000117288.
HOVERGENi HBG058014.
InParanoidi Q9JIG5.
KOi K11366.
OMAi TEKHIHE.
OrthoDBi EOG7FR7G7.
TreeFami TF323554.

Miscellaneous databases

NextBioi 311508.
PROi Q8CEG8.
SOURCEi Search...

Gene expression databases

Bgeei Q8CEG8.
Genevestigatori Q8CEG8.

Family and domain databases

InterProi IPR018200. Pept_C19ubi-hydrolase_C_CS.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view ]
Pfami PF00443. UCH. 1 hit.
[Graphical view ]
PROSITEi PS00972. USP_1. 1 hit.
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A transcript map of a 2-Mb BAC contig in the proximal portion of the mouse X chromosome and regional mapping of the scurfy mutation."
    Means G.D., Toy D.Y., Baum P.R., Derry J.M.J.
    Genomics 65:213-223(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Head and Pituitary.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.

Entry informationi

Entry nameiUBP27_MOUSE
AccessioniPrimary (citable) accession number: Q8CEG8
Secondary accession number(s): B1ATV2, Q8BSW2, Q9JIG5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: March 24, 2009
Last modified: September 3, 2014
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Caution

Although strongly related to USP22, which deubiquitinates histones, lacks the N-terminal UBP-type zinc finger, suggesting it does not have the ability to deubiquitinate histones.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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