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Protein
Submitted name:

Uncharacterized protein

Gene

Msr1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Msr1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:98257. Msr1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei56 – 81HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000025044.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini125 – 173Macscav_recInterPro annotationAdd BLAST49

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IK8A. Eukaryota.
ENOG410YQBT. LUCA.
HOVERGENiHBG002473.
KOiK06558.

Family and domain databases

InterProiView protein in InterPro
IPR008160. Collagen.
IPR003543. Macro_scav_rcpt.
PfamiView protein in Pfam
PF01391. Collagen. 2 hits.
PF03523. Macscav_rec. 1 hit.
PRINTSiPR01408. MACSCAVRCPTR.

Sequencei

Sequence statusi: Complete.

Q8CED7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKEMTENQR LCPHEQEDAD CSSESVKFDA RSMTASLPHS TKNGPSLQEK
60 70 80 90 100
LKSFKAALIA LYLLVFAVLI PVVGIVTAQL LNWEMKNCLV CSLNTSDTSQ
110 120 130 140 150
GPMEKENTSK VEMRFTIIME HMKDMEERIE SISNSKADLI DTERFQNFSM
160 170 180 190 200
ATDQRLNDIL LQLNSLISSV QEHGNSLDAI SKSLQSLNMT LLDVQLHTET
210 220 230 240 250
LNVRVRESTA KQQEDISKLE ERVYKVSAEV QSVKEEQAHV EQEVKQEVRV
260 270 280 290 300
LNNITNDLRL KDWEHSQTLK NITFIQGPPG PQGEKGDRGL TGQTGPPGAP
310 320 330 340 350
GIRGIPGVKG DRGQIGFPGG RGNPGAPGKP GRSGSPGPKG QKGEKGSVGG

SRSV
Length:354
Mass (Da):38,773
Last modified:March 1, 2003 - v1
Checksum:i348E084D2D8B644B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK028480 mRNA. Translation: BAC25973.1.
AK150518 mRNA. Translation: BAE29630.1.
AK151403 mRNA. Translation: BAE30370.1.
AK151855 mRNA. Translation: BAE30744.1.
AK155589 mRNA. Translation: BAE33337.1.
RefSeqiNP_001106797.1. NM_001113326.1.
NP_112472.2. NM_031195.2.
UniGeneiMm.239291.

Genome annotation databases

GeneIDi20288.
KEGGimmu:20288.
UCSCiuc009lmk.1. mouse.

Similar proteinsi

Entry informationi

Entry nameiQ8CED7_MOUSE
AccessioniPrimary (citable) accession number: Q8CED7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: August 30, 2017
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)