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Q8CED7

- Q8CED7_MOUSE

UniProt

Q8CED7 - Q8CED7_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Msr1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. scavenger receptor activity Source: InterPro

    GO - Biological processi

    1. lipoprotein transport Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Msr1Imported
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:98257. Msr1.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ8CED7.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00640000091447.
    HOVERGENiHBG002473.
    KOiK06558.

    Family and domain databases

    InterProiIPR008160. Collagen.
    IPR003543. Macro_scav_rcpt.
    [Graphical view]
    PfamiPF01391. Collagen. 2 hits.
    PF03523. Macscav_rec. 1 hit.
    [Graphical view]
    PRINTSiPR01408. MACSCAVRCPTR.

    Sequencei

    Sequence statusi: Complete.

    Q8CED7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTKEMTENQR LCPHEQEDAD CSSESVKFDA RSMTASLPHS TKNGPSLQEK    50
    LKSFKAALIA LYLLVFAVLI PVVGIVTAQL LNWEMKNCLV CSLNTSDTSQ 100
    GPMEKENTSK VEMRFTIIME HMKDMEERIE SISNSKADLI DTERFQNFSM 150
    ATDQRLNDIL LQLNSLISSV QEHGNSLDAI SKSLQSLNMT LLDVQLHTET 200
    LNVRVRESTA KQQEDISKLE ERVYKVSAEV QSVKEEQAHV EQEVKQEVRV 250
    LNNITNDLRL KDWEHSQTLK NITFIQGPPG PQGEKGDRGL TGQTGPPGAP 300
    GIRGIPGVKG DRGQIGFPGG RGNPGAPGKP GRSGSPGPKG QKGEKGSVGG 350
    SRSV 354
    Length:354
    Mass (Da):38,773
    Last modified:March 1, 2003 - v1
    Checksum:i348E084D2D8B644B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK028480 mRNA. Translation: BAC25973.1.
    AK150518 mRNA. Translation: BAE29630.1.
    AK151403 mRNA. Translation: BAE30370.1.
    AK151855 mRNA. Translation: BAE30744.1.
    AK155589 mRNA. Translation: BAE33337.1.
    RefSeqiNP_001106797.1. NM_001113326.1.
    NP_112472.2. NM_031195.2.
    UniGeneiMm.239291.

    Genome annotation databases

    GeneIDi20288.
    KEGGimmu:20288.
    UCSCiuc009lmk.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK028480 mRNA. Translation: BAC25973.1 .
    AK150518 mRNA. Translation: BAE29630.1 .
    AK151403 mRNA. Translation: BAE30370.1 .
    AK151855 mRNA. Translation: BAE30744.1 .
    AK155589 mRNA. Translation: BAE33337.1 .
    RefSeqi NP_001106797.1. NM_001113326.1.
    NP_112472.2. NM_031195.2.
    UniGenei Mm.239291.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 20288.
    KEGGi mmu:20288.
    UCSCi uc009lmk.1. mouse.

    Organism-specific databases

    CTDi 4481.
    MGIi MGI:98257. Msr1.

    Phylogenomic databases

    GeneTreei ENSGT00640000091447.
    HOVERGENi HBG002473.
    KOi K06558.

    Miscellaneous databases

    ChiTaRSi MSR1. mouse.
    NextBioi 297995.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q8CED7.

    Family and domain databases

    InterProi IPR008160. Collagen.
    IPR003543. Macro_scav_rcpt.
    [Graphical view ]
    Pfami PF01391. Collagen. 2 hits.
    PF03523. Macscav_rec. 1 hit.
    [Graphical view ]
    PRINTSi PR01408. MACSCAVRCPTR.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and SkinImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and SkinImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and SkinImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and SkinImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and SkinImported.
    7. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported.
    8. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and SkinImported.
    9. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Bone marrowImported and SkinImported.

    Entry informationi

    Entry nameiQ8CED7_MOUSE
    AccessioniPrimary (citable) accession number: Q8CED7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 81 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)