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Q8CE39

- Q8CE39_MOUSE

UniProt

Q8CE39 - Q8CE39_MOUSE

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Protein
Submitted name: Putative uncharacterized protein
Gene
Sorl1
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. low-density lipoprotein particle binding Source: Ensembl
  2. protein binding Source: MGI

GO - Biological processi

  1. cell migration Source: Ensembl
  2. cell proliferation Source: Ensembl
  3. protein targeting Source: Ensembl
  4. regulation of smooth muscle cell migration Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Sorl1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1202296. Sorl1.

Subcellular locationi

GO - Cellular componenti

  1. Golgi apparatus Source: Ensembl
  2. extracellular space Source: Ensembl
  3. membrane Source: Ensembl
  4. multivesicular body Source: Ensembl
  5. neuronal cell body Source: Ensembl
  6. perinuclear region of cytoplasm Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

ArrayExpressiQ8CE39.
BgeeiQ8CE39.
GenevestigatoriQ8CE39.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000058613.

Structurei

3D structure databases

ProteinModelPortaliQ8CE39.

Family & Domainsi

Phylogenomic databases

InParanoidiQ8CE39.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiIPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
[Graphical view]
SMARTiSM00060. FN3. 1 hit.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q8CE39-1 [UniParc]FASTAAdd to Basket

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KLEPGGKYHI IVQLGNMSKD SSIKITTVSL SAPDALKIIT ENDHVLLFWK    50
SLALKEKQFN ETRGYEIHMS DSAVNLTAYL GNTTDNFFKV SNLKMGHNYT 100
FTVQARCLFG SQICGEPAVL LYDELSSGAD AAVIQAARST DVAAVVVPIL 150
FLILLSLGVG FAILYTKHRR LQSSFSAFAN SHYSSRLGSA IFSSGDDLGE 200
DDEDAPMITG FSDDVPMVIA 220
Length:220
Mass (Da):23,892
Last modified:March 1, 2003 - v1
Checksum:iA501D6A65D3D0516
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK029071 mRNA. Translation: BAC26276.1.
UniGeneiMm.121920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK029071 mRNA. Translation: BAC26276.1 .
UniGenei Mm.121920.

3D structure databases

ProteinModelPortali Q8CE39.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000058613.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

MGIi MGI:1202296. Sorl1.

Phylogenomic databases

InParanoidi Q8CE39.

Miscellaneous databases

SOURCEi Search...

Gene expression databases

ArrayExpressi Q8CE39.
Bgeei Q8CE39.
Genevestigatori Q8CE39.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
InterProi IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
[Graphical view ]
SMARTi SM00060. FN3. 1 hit.
[Graphical view ]
SUPFAMi SSF49265. SSF49265. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: SkinImported.

Entry informationi

Entry nameiQ8CE39_MOUSE
AccessioniPrimary (citable) accession number: Q8CE39
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: June 11, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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