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Q8CE39

- Q8CE39_MOUSE

UniProt

Q8CE39 - Q8CE39_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Sorl1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. low-density lipoprotein particle binding Source: Ensembl
    2. protein binding Source: MGI

    GO - Biological processi

    1. cell migration Source: Ensembl
    2. cell proliferation Source: Ensembl
    3. protein targeting Source: Ensembl
    4. regulation of smooth muscle cell migration Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Sorl1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1202296. Sorl1.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular space Source: Ensembl
    2. Golgi apparatus Source: Ensembl
    3. membrane Source: Ensembl
    4. multivesicular body Source: Ensembl
    5. neuronal cell body Source: Ensembl
    6. perinuclear region of cytoplasm Source: MGI

    Expressioni

    Gene expression databases

    ArrayExpressiQ8CE39.
    BgeeiQ8CE39.
    GenevestigatoriQ8CE39.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000058613.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8CE39.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    InParanoidiQ8CE39.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    InterProiIPR003961. Fibronectin_type3.
    IPR013783. Ig-like_fold.
    [Graphical view]
    SMARTiSM00060. FN3. 1 hit.
    [Graphical view]
    SUPFAMiSSF49265. SSF49265. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    Q8CE39-1 [UniParc]FASTAAdd to Basket

    « Hide

    KLEPGGKYHI IVQLGNMSKD SSIKITTVSL SAPDALKIIT ENDHVLLFWK    50
    SLALKEKQFN ETRGYEIHMS DSAVNLTAYL GNTTDNFFKV SNLKMGHNYT 100
    FTVQARCLFG SQICGEPAVL LYDELSSGAD AAVIQAARST DVAAVVVPIL 150
    FLILLSLGVG FAILYTKHRR LQSSFSAFAN SHYSSRLGSA IFSSGDDLGE 200
    DDEDAPMITG FSDDVPMVIA 220
    Length:220
    Mass (Da):23,892
    Last modified:March 1, 2003 - v1
    Checksum:iA501D6A65D3D0516
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK029071 mRNA. Translation: BAC26276.1.
    UniGeneiMm.121920.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK029071 mRNA. Translation: BAC26276.1 .
    UniGenei Mm.121920.

    3D structure databases

    ProteinModelPortali Q8CE39.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000058613.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:1202296. Sorl1.

    Phylogenomic databases

    InParanoidi Q8CE39.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q8CE39.
    Bgeei Q8CE39.
    Genevestigatori Q8CE39.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    InterProi IPR003961. Fibronectin_type3.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    SMARTi SM00060. FN3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49265. SSF49265. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.

    Entry informationi

    Entry nameiQ8CE39_MOUSE
    AccessioniPrimary (citable) accession number: Q8CE39
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)