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Protein

Radial spoke head protein 6 homolog A

Gene

Rsph6a

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Radial spoke head protein 6 homolog A
Alternative name(s):
Radial spoke head-like protein 1
Gene namesi
Name:Rsph6a
Synonyms:Rshl1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1927643. Rsph6a.

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003127611 – 708Radial spoke head protein 6 homolog AAdd BLAST708

Proteomic databases

PaxDbiQ8CDR2.
PRIDEiQ8CDR2.

PTM databases

PhosphoSitePlusiQ8CDR2.

Expressioni

Tissue specificityi

Expressed in testis.1 Publication

Gene expression databases

BgeeiENSMUSG00000040866.
CleanExiMM_RSHL1.
ExpressionAtlasiQ8CDR2. baseline and differential.
GenevisibleiQ8CDR2. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000046526.

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi350 – 388Glu-richAdd BLAST39
Compositional biasi495 – 707Glu-richAdd BLAST213

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG410IF1Z. Eukaryota.
ENOG410XQP5. LUCA.
GeneTreeiENSGT00500000044869.
HOGENOMiHOG000006653.
HOVERGENiHBG070874.
InParanoidiQ8CDR2.
OMAiWVNPLQK.
OrthoDBiEOG091G0FGU.
PhylomeDBiQ8CDR2.
TreeFamiTF324531.

Family and domain databases

InterProiView protein in InterPro
IPR006802. Radial_spoke.
PANTHERiPTHR13159. PTHR13159. 1 hit.
PfamiView protein in Pfam
PF04712. Radial_spoke. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8CDR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGEPPPNPDP SQTRRASQGS ERARSQEYSQ PLLTIPEDGL NRPPPQRGSR
60 70 80 90 100
SSQGSQDLQG TGLPHWPQRS SLVPDVQGDE GTEYHQSMPL GYTPGFPMEF
110 120 130 140 150
SQQGYLDDSR MMEQFPQGQD LLEQLESTYQ GSASGILGQL NLYPREDEIF
160 170 180 190 200
SQDTQHGPYL RDDPSLHLRP SDLGFMPIVG EVPDPEPREL AIQNAKAYLL
210 220 230 240 250
RTSMSCNLSL YEHLVNLLTK ILNQRPEDPL SILESLNRTM QWEWFHPKLD
260 270 280 290 300
TLRDDPEMQP TYEMAEKQKA LFIRGGGEGE QEMEEEVTDS PVPNIMETAF
310 320 330 340 350
YFEQAGVGLS SDESFRIFLA LKQLVEQQPI HMCRFWGKIL GLSRSYLVAE
360 370 380 390 400
VEFREGEEEG EEEEVEEMME GGEVLETHGE EEGEEDEEKV VDSVPKPQWK
410 420 430 440 450
PPPIIPKEES RSGTNKYLYF VCNEPGRPWT RLPHVTPAQI VCARKIKKFF
460 470 480 490 500
TGFLDTPVIS YPPFPGNEAN YLRAQIARIS AATHISPLGF YQFGEEEGDE
510 520 530 540 550
EEEGGAGRDS FEENPDFEGI PVLELVDSMA NWVHHTQHIL PQGRCTWVNP
560 570 580 590 600
LQKTEEEEEL GEEEEKADEA MEEVEQEVGP PLLTPLSEDA EIMHLSPWTT
610 620 630 640 650
RLSCSLSPQY SVAIVRSNLW PGAYAYATGK KFENIYIGWG HKYSPENFNP
660 670 680 690 700
MLPALIQQEY PSGPEITEMS DPTVEEEQAL KAAQEQALAA AEEEEEDEEE

EEDEDLED
Length:708
Mass (Da):80,202
Last modified:March 1, 2003 - v1
Checksum:i467FD78288CEF1A5
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti221I → L in AAK19323 (PubMed:11237735).Curated1
Sequence conflicti575E → K in AAK19323 (PubMed:11237735).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF329192 mRNA. Translation: AAK19323.1.
AK029699 mRNA. Translation: BAC26571.1.
CCDSiCCDS20887.1.
RefSeqiNP_001153143.1. NM_001159671.1.
NP_112545.2. NM_031255.2.
UniGeneiMm.84435.

Genome annotation databases

EnsembliENSMUST00000035521; ENSMUSP00000046526; ENSMUSG00000040866.
GeneIDi83434.
KEGGimmu:83434.
UCSCiuc009fkj.2. mouse.

Similar proteinsi

Entry informationi

Entry nameiRSH6A_MOUSE
AccessioniPrimary (citable) accession number: Q8CDR2
Secondary accession number(s): Q99MM8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: March 1, 2003
Last modified: June 7, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome