Q8CDQ9 (Q8CDQ9_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAC26578.1

Gene names

Name:	Hyal6 MGI 1921659
Synonyms:	Hyal-ps1 MGI 1921659

Organism

Mus musculus (Mouse) EMBL BAC26578.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	500 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hyalurononglucosaminidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8CDQ9 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: B0FC2FA01CDF1985	FASTA	500	58,023
	10 20 30 40 50 60 MFIQWVTQLG ELVLFVLLVA PAALKPAMPP VIKDHPFNVF WAAPTLFCKD NFNVNMNLQV 70 80 90 100 110 120 FNIIPNPFET QSGSTITVFY PKELGYYPYF SEDGTSFYGG IPQKVNLSEH LRKSAGDIAD 130 140 150 160 170 180 AVTLWRSEGL AVIDWEGWRP QWDRNWGSRM IYKNHSLAFT RHHHPDWAET KVRTAAQKEF 190 200 210 220 230 240 ENAGRSFMNV TLTLALEMRP KRLWGFYLYP DCYNYDYRIN PEFYTGSCPD DEIFRNDQLM 250 260 270 280 290 300 WLWEKSAALY PSIYLSKILK SNLNALKFVH FRVREALRVA EMARKDYVLP VFIFSRPFYL 310 320 330 340 350 360 QSIEALSEED LVHTIGESAA LGAAGIILWG GYEYSDTKET CLSVRQTVHG LLGPYVLNVT 370 380 390 400 410 420 SAAKLCSQNL CNSHGRCVRK TPESSFYLHM PEDSHKNYVS KKGFRFVIPS PSKLKHNNEY 430 440 450 460 470 480 EEWICVPLLL WLAWRLLQIS LSKSPKEQSS CKWIEFSSYC WHGLICDSDE LFSYSLLQWQ 490 500 FFLETTEEKR NYLSLISSIF

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed: 10349636] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
[2]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed: 16141073] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
[3]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
[4]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
[5]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
[6]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed: 11042159] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
[7]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed: 11076861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
[8]	Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K. , Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26578.1. Tissue: Testis EMBL BAC26578.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK029715 mRNA. Translation: BAC26578.1.
IPI	IPI00228897.
UniGene	Mm.87331.
3D structure databases
HSSP	HSSP built from PDB template 1FCQ based on UniProtKB Q08169.
ProteinModelPortal	Q8CDQ9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q8CDQ9.
Protein family/group databases
CAZy	GH56. Glycoside Hydrolase Family 56.
Proteomic databases
PRIDE	Q8CDQ9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
eggNOG	maNOG04108.
HOVERGEN	HBG052053.
Gene expression databases
Bgee	Q8CDQ9.
Genevestigator	Q8CDQ9.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR017853. Glycoside_hydrolase_SF. IPR018155. Hyaluronidase. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PANTHER	PTHR11769. Glyco_hydro_56. 1 hit.
Pfam	PF01630. Glyco_hydro_56. 1 hit. [Graphical view]
PIRSF	PIRSF038193. Hyaluronidase. 1 hit.
PRINTS	PR00846. GLHYDRLASE56.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8CDQ9_MOUSE

Accession

Primary (citable) accession number: Q8CDQ9

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	October 19, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)