Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Prominin-1

Gene

Prom1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Prominin-1Imported
Gene namesi
Name:Prom1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:1100886. Prom1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei99 – 128HelicalSequence analysisAdd BLAST30
Transmembranei149 – 170HelicalSequence analysisAdd BLAST22
Transmembranei425 – 453HelicalSequence analysisAdd BLAST29
Transmembranei473 – 499HelicalSequence analysisAdd BLAST27
Transmembranei786 – 806HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_500878427820 – 827Sequence analysisAdd BLAST808

Expressioni

Gene expression databases

BgeeiENSMUSG00000029086.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000073751.

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili245 – 289Sequence analysisAdd BLAST45

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4331. Eukaryota.
ENOG410XRG0. LUCA.
GeneTreeiENSGT00530000063586.
HOVERGENiHBG053690.

Family and domain databases

InterProiIPR008795. Prominin.
[Graphical view]
PfamiPF05478. Prominin. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8CDK8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALVFSALLL LGLCGKISSE GQPAFHNTPG AMNYELPTTK YETQDTFNAG
60 70 80 90 100
IVGPLYKMVH IFLNVVQPND FPLDLIKKLI QNKNFDISVD SKEIALYEIG
110 120 130 140 150
VLICAILGLL FIILMPLVGC FFCMCRCCNK CGGEMHQRQK QNAPCRRKCL
160 170 180 190 200
GLSLLVICLL MSLGIIYGFV ANQQTRTRIK GTQKLAKSNF RDFQTLLTET
210 220 230 240 250
PKQIDYVVEQ YTNTKNKAFS DLDGIGSVLG GRIKDQLKPK VTPVLEEIKA
260 270 280 290 300
MATAIKQTKD ALQNMSSSLK SLQDAATQLN TNLSSVRNSI ENSLSSSDCT
310 320 330 340 350
SDPASKICDS IRPSLSSLGS SLNSSQLPSV DRELNTVTEV DKTDLESLVK
360 370 380 390 400
RGYTTIDEIP NTIQNQTVDV IKDVKNTLDS ISSNIKDMSQ SIPIEDMLLQ
410 420 430 440 450
VSHYLNNSNR YLNQELPKLE EYDSYWWLGG LIVCFLLTLI VTFFFLGLLC
460 470 480 490 500
GVFGYDKHAT PTRRGCVSNT GGIFLMAGVG FGFLFCWILM ILVVLTFVVG
510 520 530 540 550
ANVEKLLCEP YENKKLLQVL DTPYLLKEQW QFYLSGMLFN NPDINMTFEQ
560 570 580 590 600
VYRDCKRGRG IYAAFQLENV VNVSDHFNID QISENINTEL ENLNVNIDSI
610 620 630 640 650
ELLDNTGRKS LEDFAHSGID TIDYSTYLKE TEKSPTEVNL LTFASTLEAK
660 670 680 690 700
ANQLPEGKLK QAFLLDVQNI RAIHQHLLPP VQQSLNTLRQ SVWTLQQTSN
710 720 730 740 750
KLPEKVKKIL ASLDSVQHFL TNNVSLIVIG ETKKFGKTIL GYFEHYLHWV
760 770 780 790 800
FYAITEKMTS CKPMATAMDS AVNGILCGYV ADPLNLFWFG IGKATVLLLP
810 820
AVIIAIKLAK YYRRMDSEDV YDDPSRY
Length:827
Mass (Da):92,715
Last modified:March 1, 2003 - v1
Checksum:iDBCA5ED2DF401A18
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC102476 Genomic DNA. No translation available.
AC103621 Genomic DNA. No translation available.
AC164004 Genomic DNA. No translation available.
AK029921 mRNA. Translation: BAC26678.1.
RefSeqiNP_001157049.1. NM_001163577.1.
NP_001157056.1. NM_001163584.1.
NP_032961.2. NM_008935.2.
XP_006503852.1. XM_006503789.1.
XP_006503853.1. XM_006503790.3.
UniGeneiMm.6250.

Genome annotation databases

EnsembliENSMUST00000165909; ENSMUSP00000129909; ENSMUSG00000029086.
ENSMUST00000177946; ENSMUSP00000136483; ENSMUSG00000029086.
GeneIDi19126.
UCSCiuc008xie.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC102476 Genomic DNA. No translation available.
AC103621 Genomic DNA. No translation available.
AC164004 Genomic DNA. No translation available.
AK029921 mRNA. Translation: BAC26678.1.
RefSeqiNP_001157049.1. NM_001163577.1.
NP_001157056.1. NM_001163584.1.
NP_032961.2. NM_008935.2.
XP_006503852.1. XM_006503789.1.
XP_006503853.1. XM_006503790.3.
UniGeneiMm.6250.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000073751.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000165909; ENSMUSP00000129909; ENSMUSG00000029086.
ENSMUST00000177946; ENSMUSP00000136483; ENSMUSG00000029086.
GeneIDi19126.
UCSCiuc008xie.1. mouse.

Organism-specific databases

CTDi8842.
MGIiMGI:1100886. Prom1.

Phylogenomic databases

eggNOGiKOG4331. Eukaryota.
ENOG410XRG0. LUCA.
GeneTreeiENSGT00530000063586.
HOVERGENiHBG053690.

Miscellaneous databases

ChiTaRSiProm1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000029086.

Family and domain databases

InterProiIPR008795. Prominin.
[Graphical view]
PfamiPF05478. Prominin. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8CDK8_MOUSE
AccessioniPrimary (citable) accession number: Q8CDK8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: November 30, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.