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Protein
Submitted name:

Uncharacterized protein

Gene

Lima1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Lima1Imported
Synonyms:D15Ertd366eImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1920992. Lima1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMUSG00000023022.

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiQ8CD09.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini226 – 286LIM zinc-bindingInterPro annotationAdd BLAST61

Keywords - Domaini

LIM domainPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410ITI7. Eukaryota.
ENOG41102B0. LUCA.
HOVERGENiHBG051492.

Family and domain databases

InterProiView protein in InterPro
IPR028740. EPLIN.
IPR001781. Znf_LIM.
PANTHERiPTHR24206:SF50. PTHR24206:SF50. 1 hit.
PfamiView protein in Pfam
PF00412. LIM. 1 hit.
SMARTiView protein in SMART
SM00132. LIM. 1 hit.
PROSITEiView protein in PROSITE
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8CD09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENCLGDSRH EAEKPETSEN TETSGKIEKY NVPLNRLKMM FEKGEHNQTK
60 70 80 90 100
SLWTQSRNAG GRRLSENNCS LDDWEIGAGH LSSSAFNSEK NESKRNLELP
110 120 130 140 150
RLSETSIKDR MAKYQAAVSK QSSPASYTNE LKTSESKTHK WEQKENVPPG
160 170 180 190 200
PEACSVHQEG SKVSTTENSL VALSVPAEDD TCNSQVKSEA QQPMHPKPLS
210 220 230 240 250
PDARTSSLPE SSPSKTAKKF QAPAKESCVE CQKTVYPMER LLANQQVFHI
260 270 280 290 300
SCFRCSYCNN KLSLGTYASL HGRIYCKPHF NQLFKSKGNY DEGFGHKQHK
310 320 330 340 350
DLWASKSDNE ETLGRPAQPP NAGESPHSPG VEDAPIAKVG VLAASMEAKA
360 370 380 390 400
SSQREREDKP AETKKLRIAW PPPAELGGSG SALEEGIKVS KPKWPPEDDV
410 420 430 440 450
CKTEAPEDVD LDLKKLRRSS SLKERSRPFT VAASFRTSSI KSPKASSPSL
460 470 480 490 500
RKGWSESEQS EEFGGGIATM ERKQTENARP SGEKENVGKS RWQGEEVPRS
510 520 530 540 550
KDRSSFELES ENFMENGANI AEDDNHVHAQ QSPLEPEAPG WSGFVDTTAA
560 570 580 590
KEFTTQNQKS QDVGFWEGEV VRELSVEEQI KRNRYYDEDE DEE
Length:593
Mass (Da):66,018
Last modified:March 1, 2003 - v1
Checksum:i122AB8AA07E1FC0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK031698 mRNA. Translation: BAC27520.1.
AK132314 mRNA. Translation: BAE21099.1.
AK167220 mRNA. Translation: BAE39345.1.
RefSeqiNP_001107017.1. NM_001113545.1.
NP_075550.2. NM_023063.4.
UniGeneiMm.33207.

Genome annotation databases

GeneIDi65970.
KEGGimmu:65970.

Similar proteinsi

Entry informationi

Entry nameiQ8CD09_MOUSE
AccessioniPrimary (citable) accession number: Q8CD09
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: November 22, 2017
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)