Reviewed,
UniProtKB/Swiss-Prot Q8CBW3 (ABI1_MOUSE)
Last modified
November 24, 2009.
Version 81.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Abl interactor 1 Alternative name(s): Abelson interactor 1 Short name=Abi-1 Spectrin SH3 domain-binding protein 1 Eps8 SH3 domain-binding protein Short name=Eps8-binding protein e3B1 Ablphilin-1 | ||||
| Gene names |
| ||||
| Organism | Mus musculus (Mouse) | ||||
| Taxonomic identifier | 10090 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 481 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May act in negative regulation of cell growth and transformation by interacting with nonreceptor tyrosine kinases ABL1 and/or ABL2. In vitro, at least isoform 2 and isoform 4 suppress the transforming activity of Abelson murine leukemia virus (v-Abl) after overexpression in fibroblasts. May play a role in regulation EGF-induced Erk pathway activation. Involved in cytoskeletal reorganization and EGFR signaling. Together with EPS8 participates in transduction of signals from Ras to Rac. In vitro, a trimeric complex of ABI1, EPS8 and SOS1 exhibits Rac specific guanine nucleotide exchange factor (GEF) activity and ABI1 seems to act as an adapter in the complex. Regulates ABL1/c-Abl-mediated phosphorylation of MENA By similarity. Recruits WASF1 to lamellipodia and there seems to regulate WASF1 protein level. |
| Subunit structure | Interacts with MENA, Abelson murine leukemia virus V-ABL, ABL1, STX1A, SNAP25, VAMP2, and through its N-terminus with WASF1. Part of a complex consisting of ABI1, STX1A and SNAP25. Part of a complex consisting of ABI1, EPS8 and SOS1. Interacts with EPS8, SOS1, SOS2, GRB2, SPTA1, and the first SH3 domain of NCK1 By similarity. Component of the WAVE2 complex composed of ABI1, CYFIP1/SRA1, NCKAP1/NAP1 and WASF2/WAVE2. |
| Subcellular location | Cytoplasm By similarity. Nucleus By similarity. Cell projection › lamellipodium By similarity. Cell projection › filopodium By similarity. Cell projection › growth cone By similarity. Cell junction › synapse › synaptosome By similarity. Cytoplasm › cytoskeleton By similarity. Note: Localized to protruding lamellipodia and filopodia tips. Also localized to neuronal growth cones and synaptosomes By similarity. |
| Tissue specificity | Widely expressed with highest levels in bone marrow, spleen, brain, testes, and embryonic brain. In adult brain prominently expressed in the neocortex, hippocampus and dentate gyrus. Ref.5 Ref.9 |
| Developmental stage | Detected at E10 and E12 in developing brain, but does not appear more prominent in the neuroepithelium compared to the surrounding tissue. Ref.9 |
| Domain | The t-SNARE coiled-coil homology domain is necessary and sufficient for interaction with STX1A. |
| Post-translational modification | In vitro substrate for v-Abl. Phosphorylated on tyrosine residues after serum stimulation or induction by v-Abl By similarity. |
| Sequence similarities | Belongs to the ABI family. Contains 1 SH3 domain. Contains 1 t-SNARE coiled-coil homology domain. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| ABL1 | P00519 | 1 | EBI-375511,EBI-375543 | From a different organism. |
| EPS8 | Q12929 | 1 | EBI-375511,EBI-375576 | From a different organism. |
| Eps8 | Q08509 | 1 | EBI-375511,EBI-375596 | |
| Prpf40a | Q9R1C7-1 | 2 | EBI-375511,EBI-645566 |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8CBW3-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8CBW3-2) Also known as: short; The sequence of this isoform differs from the canonical sequence as follows: 154-158: Missing. 274-274: Missing. 333-361: Missing. | ||||||
| Isoform 3 (identifier: Q8CBW3-3) The sequence of this isoform differs from the canonical sequence as follows: 154-158: Missing. | ||||||
| Isoform 4 (identifier: Q8CBW3-4) Also known as: long; The sequence of this isoform differs from the canonical sequence as follows: 154-158: Missing. 274-274: Missing. | ||||||
| Isoform 5 (identifier: Q8CBW3-5) The sequence of this isoform differs from the canonical sequence as follows: 154-158: Missing. 274-362: AAPGAAPGSQ...GFVARVQENI → V |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed By similarity | ||||||
| Chain | 2 – 481 | 480 | Abl interactor 1 | PRO_0000191788 | |||||
Regions | |||||||||
| Domain | 45 – 107 | 63 | t-SNARE coiled-coil homology | ||||||
| Domain | 419 – 478 | 60 | SH3 | ||||||
| Region | 18 – 79 | 62 | Required for binding to WASF1 | ||||||
| Compositional bias | 337 – 391 | 55 | Pro-rich | ||||||
Amino acid modifications | |||||||||
| Modified residue | 2 | 1 | N-acetylalanine By similarity | ||||||
| Modified residue | 183 | 1 | Phosphoserine Ref.14 Ref.15 Ref.16 Ref.17 | ||||||
| Modified residue | 213 | 1 | Phosphotyrosine Ref.17 Ref.12 | ||||||
| Modified residue | 216 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 222 | 1 | Phosphoserine Ref.15 Ref.16 | ||||||
| Modified residue | 225 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 306 | 1 | Phosphotyrosine By similarity | ||||||
| Modified residue | 428 | 1 | Phosphotyrosine Ref.13 | ||||||
Natural variations | |||||||||
| Alternative sequence | 154 – 158 | 5 | Missing in isoform 2, isoform 3, isoform 4 and isoform 5. | VSP_010756 | |||||
| Alternative sequence | 274 – 362 | 89 | AAPGA…VQENI → V in isoform 5. | VSP_022636 | |||||
| Alternative sequence | 274 | 1 | Missing in isoform 2 and isoform 4. | VSP_010757 | |||||
| Alternative sequence | 333 – 361 | 29 | Missing in isoform 2. | VSP_010758 | |||||
Experimental info | |||||||||
| Sequence conflict | 313 | 1 | A → T in AAH04657. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Inhibition of v-Abl transformation in 3T3 cells overexpressing different forms of the Abelson interactor protein Abi-1." Ikeguchi A., Yang H.-Y., Gao G., Goff S.P. Oncogene 20:4926-4934(2001) [PubMed: 11526477] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 4), ALTERNATIVE SPLICING (ISOFORM 2), FUNCTION. Strain: BALB/c. |
| [2] | "t(10;11)-acute leukemias with MLL-AF10 and MLL-ABI1 chimeric transcripts: specific expression patterns of ABI1 gene in leukemia and solid tumor cell lines." Shibuya N., Taki T., Mugishima H., Chin M., Tsuchida M., Sako M., Kawa K., Ishii E., Miura I., Yanagisawa M., Hayashi Y. Genes Chromosomes Cancer 32:1-10(2001) [PubMed: 11477655] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). |
| [3] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 5). Strain: C57BL/6J. Tissue: Bone marrow and Diencephalon. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). |
| [5] | "Abl-interactor-1, a novel SH3 protein binding to the carboxy-terminal portion of the Abl protein, suppresses v-abl transforming activity." Shi Y., Alin K., Goff S.P. Genes Dev. 9:2583-2597(1995) [PubMed: 7590237] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 70-360 (ISOFORM 4), FUNCTION, PHOSPHORYLATION, TISSUE SPECIFICITY, INTERACTION WITH ABL1 AND V-ABL. |
| [6] | "EPS8 and E3B1 transduce signals from Ras to Rac." Scita G., Nordstrom J., Carbone R., Tenca P., Giardina G., Gutkind S., Bjarnegard M., Betsholtz C., Di Fiore P.P. Nature 401:290-293(1999) [PubMed: 10499589] [Abstract] Cited for: FUNCTION, IDENTIFICATION IN A COMPLEX WITH EPS8 AND SOS1. |
| [7] | "Abl interactor 1 promotes tyrosine 296 phosphorylation of mammalian enabled (Mena) by c-Abl kinase." Tani K., Sato S., Sukezane T., Kojima H., Hirose H., Hanafusa H., Shishido T. J. Biol. Chem. 278:21685-21692(2003) [PubMed: 12672821] [Abstract] Cited for: FUNCTION, INTERACTION WITH MENA. |
| [8] | "Abl interactor 1 (Abi-1) wave-binding and SNARE domains regulate its nucleocytoplasmic shuttling, lamellipodium localization, and wave-1 levels." Echarri A., Lai M.J., Robinson M.R., Pendergast A.M. Mol. Cell. Biol. 24:4979-4993(2004) [PubMed: 15143189] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH STX1A; SNAP25; VAMP2 AND WASF1. |
| [9] | "Localization and phosphorylation of Abl-interactor proteins, Abi-1 and Abi-2, in the developing nervous system." Courtney K.D., Grove M., Vandongen H., Vandongen A., LaMantia A.-S., Pendergast A.M. Mol. Cell. Neurosci. 16:244-257(2000) [PubMed: 10995551] [Abstract] Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE. |
| [10] | "The Abl interactor proteins localize to sites of actin polymerization at the tips of lamellipodia and filopodia." Stradal T.E.B., Courtney K.D., Rottner K., Hahne P., Small J.V., Pendergast A.M. Curr. Biol. 11:891-895(2001) [PubMed: 11516653] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [11] | "Sra-1 and Nap1 link Rac to actin assembly driving lamellipodia formation." Steffen A., Rottner K., Ehinger J., Innocenti M., Scita G., Wehland J., Stradal T.E.B. EMBO J. 23:749-759(2004) [PubMed: 14765121] [Abstract] Cited for: COMPONENT OF WAVE2 COMPLEX. Strain: C57BL/6. Tissue: Brain. |
| [12] | "Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks." Wolf-Yadlin A., Hautaniemi S., Lauffenburger D.A., White F.M. Proc. Natl. Acad. Sci. U.S.A. 104:5860-5865(2007) [PubMed: 17389395] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-213, MASS SPECTROMETRY. |
| [13] | "Large-scale identification and evolution indexing of tyrosine phosphorylation sites from murine brain." Ballif B.A., Carey G.R., Sunyaev S.R., Gygi S.P. J. Proteome Res. 7:311-318(2008) [PubMed: 18034455] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-428, MASS SPECTROMETRY. Tissue: Brain. |
| [14] | "Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations." Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F., Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D., Gerrits B., Panse C., Schlapbach R., Mansuy I.M. Mol. Cell. Proteomics 6:283-293(2007) [PubMed: 17114649] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183, MASS SPECTROMETRY. Tissue: Brain cortex. |
| [15] | "Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry." Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J., Faessler R., Mann M. J. Proteome Res. 7:5314-5326(2008) [PubMed: 18973353] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183 AND SER-222, MASS SPECTROMETRY. |
| [16] | "The phagosomal proteome in interferon-gamma-activated macrophages." Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P. Immunity 30:143-154(2009) [PubMed: 19144319] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183 AND SER-222, MASS SPECTROMETRY. Tissue: Macrophage. |
| [17] | "Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry." Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J. Mol. Cell. Proteomics 8:904-912(2009) [PubMed: 19131326] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183 AND TYR-213, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AF420251 mRNA. Translation: AAL16036.1. AY033645 mRNA. Translation: AAK59381.1. AK034476 mRNA. Translation: BAC28722.1. AK152061 mRNA. Translation: BAE30917.1. AK152184 mRNA. Translation: BAE31015.1. AK151026 mRNA. Translation: BAE30044.1. BC004657 mRNA. Translation: AAH04657.1. U17698 mRNA. Translation: AAB00373.1. Sequence problems. | |
| IPI | IPI00454179. IPI00551347. IPI00653749. IPI00659927. IPI00798483. |
| RefSeq | NP_001070658.1. NP_001070660.1. NP_001070661.1. NP_031406.2. |
| UniGene | Mm.205647 Mm.249752 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q8CBW3. 22 interactions. |
| STRING | Q8CBW3. |
PTM databases | |
| PhosphoSite | Q8CBW3. |
Proteomic databases | |
| PRIDE | Q8CBW3. |
Genome annotation databases | |
| Ensembl | ENSMUST00000078977; ENSMUSP00000077997; ENSMUSG00000058835; Mus musculus. [Genome view] ENSMUST00000091394; ENSMUSP00000088957; ENSMUSG00000058835; Mus musculus. [Genome view] ENSMUST00000093171; ENSMUSP00000090860; ENSMUSG00000058835; Mus musculus. [Genome view] ENSMUST00000114544; ENSMUSP00000110191; ENSMUSG00000058835; Mus musculus. [Genome view] |
| GeneID | 11308. |
| KEGG | mmu:11308. |
| UCSC | uc008ins.1. mouse. uc008int.1. mouse. uc008inu.1. mouse. uc008inv.1. mouse. |
Organism-specific databases | |
| CTD | 11308. |
| MGI | MGI:104913. Abi1. |
Phylogenomic databases | |
| HOGENOM | Q8CBW3. |
| HOVERGEN | Q8CBW3. |
| OMA | IADSPTP |
Gene expression databases | |
| ArrayExpress | Q8CBW3. |
| Bgee | Q8CBW3. |
| CleanEx | MM_ABI1. |
| Genevestigator | Q8CBW3. |
Family and domain databases | |
| InterPro | IPR012849. Abl-interactor_HHR. IPR000108. Neu_cyt_fact_2. IPR001452. SH3_domain. IPR020473. SH3_region. IPR000727. T_SNARE. [Graphical view] |
| Pfam | PF07815. Abi_HHR. 1 hit. PF00018. SH3_1. 1 hit. [Graphical view] |
| PRINTS | PR00499. P67PHOX. PR00452. SH3DOMAIN. |
| SMART | SM00326. SH3. 1 hit. [Graphical view] |
| PROSITE | PS50002. SH3. 1 hit. PS50192. T_SNARE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 278608. |
| SOURCE | Search... |
Entry information
| Entry name | ABI1_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q8CBW3 Secondary accession number(s): Q3U8V0 Q99KH4 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


