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Reviewed, UniProtKB/Swiss-Prot Q8CBW3 (ABI1_MOUSE)

Last modified November 24, 2009. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Abl interactor 1
Alternative name(s):
    Abelson interactor 1
      Short name=Abi-1
    Spectrin SH3 domain-binding protein 1
    Eps8 SH3 domain-binding protein
      Short name=Eps8-binding protein
    e3B1
    Ablphilin-1
Gene names
Name: Abi1
Synonyms: Ssh3bp1
OrganismMus musculus (Mouse)
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMus

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

May act in negative regulation of cell growth and transformation by interacting with nonreceptor tyrosine kinases ABL1 and/or ABL2. In vitro, at least isoform 2 and isoform 4 suppress the transforming activity of Abelson murine leukemia virus (v-Abl) after overexpression in fibroblasts. May play a role in regulation EGF-induced Erk pathway activation. Involved in cytoskeletal reorganization and EGFR signaling. Together with EPS8 participates in transduction of signals from Ras to Rac. In vitro, a trimeric complex of ABI1, EPS8 and SOS1 exhibits Rac specific guanine nucleotide exchange factor (GEF) activity and ABI1 seems to act as an adapter in the complex. Regulates ABL1/c-Abl-mediated phosphorylation of MENA By similarity. Recruits WASF1 to lamellipodia and there seems to regulate WASF1 protein level.

Subunit structure

Interacts with MENA, Abelson murine leukemia virus V-ABL, ABL1, STX1A, SNAP25, VAMP2, and through its N-terminus with WASF1. Part of a complex consisting of ABI1, STX1A and SNAP25. Part of a complex consisting of ABI1, EPS8 and SOS1. Interacts with EPS8, SOS1, SOS2, GRB2, SPTA1, and the first SH3 domain of NCK1 By similarity. Component of the WAVE2 complex composed of ABI1, CYFIP1/SRA1, NCKAP1/NAP1 and WASF2/WAVE2.

Subcellular location

Cytoplasm By similarity. Nucleus By similarity. Cell projectionlamellipodium By similarity. Cell projectionfilopodium By similarity. Cell projectiongrowth cone By similarity. Cell junctionsynapsesynaptosome By similarity. Cytoplasmcytoskeleton By similarity. Note: Localized to protruding lamellipodia and filopodia tips. Also localized to neuronal growth cones and synaptosomes By similarity.

Tissue specificity

Widely expressed with highest levels in bone marrow, spleen, brain, testes, and embryonic brain. In adult brain prominently expressed in the neocortex, hippocampus and dentate gyrus. Ref.5 Ref.9

Developmental stage

Detected at E10 and E12 in developing brain, but does not appear more prominent in the neuroepithelium compared to the surrounding tissue. Ref.9

Domain

The t-SNARE coiled-coil homology domain is necessary and sufficient for interaction with STX1A.

Post-translational modification

In vitro substrate for v-Abl. Phosphorylated on tyrosine residues after serum stimulation or induction by v-Abl By similarity.

Sequence similarities

Belongs to the ABI family.

Contains 1 SH3 domain.

Contains 1 t-SNARE coiled-coil homology domain.

Binary interactions

With

Entry

#Exp.

IntAct

Notes

ABL1P005191EBI-375511,EBI-375543From a different organism.
EPS8Q129291EBI-375511,EBI-375576From a different organism.
Eps8Q085091EBI-375511,EBI-375596
Prpf40aQ9R1C7-12EBI-375511,EBI-645566

Alternative products

This entry describes 5 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q8CBW3-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q8CBW3-2)

Also known as: short;

The sequence of this isoform differs from the canonical sequence as follows:
     154-158: Missing.
     274-274: Missing.
     333-361: Missing.
Isoform 3 (identifier: Q8CBW3-3)

The sequence of this isoform differs from the canonical sequence as follows:
     154-158: Missing.
Isoform 4 (identifier: Q8CBW3-4)

Also known as: long;

The sequence of this isoform differs from the canonical sequence as follows:
     154-158: Missing.
     274-274: Missing.
Isoform 5 (identifier: Q8CBW3-5)

The sequence of this isoform differs from the canonical sequence as follows:
     154-158: Missing.
     274-362: AAPGAAPGSQ...GFVARVQENI → V

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 481480Abl interactor 1
PRO_0000191788

Regions

Domain45 – 10763t-SNARE coiled-coil homology
Domain419 – 47860SH3
Region18 – 7962Required for binding to WASF1
Compositional bias337 – 39155Pro-rich

Amino acid modifications

Modified residue21N-acetylalanine By similarity
Modified residue1831Phosphoserine Ref.14 Ref.15 Ref.16 Ref.17
Modified residue2131Phosphotyrosine Ref.17 Ref.12
Modified residue2161Phosphoserine By similarity
Modified residue2221Phosphoserine Ref.15 Ref.16
Modified residue2251Phosphoserine By similarity
Modified residue3061Phosphotyrosine By similarity
Modified residue4281Phosphotyrosine Ref.13

Natural variations

Alternative sequence154 – 1585Missing in isoform 2, isoform 3, isoform 4 and isoform 5.
VSP_010756
Alternative sequence274 – 36289AAPGA…VQENI → V in isoform 5.
VSP_022636
Alternative sequence2741Missing in isoform 2 and isoform 4.
VSP_010757
Alternative sequence333 – 36129Missing in isoform 2.
VSP_010758

Experimental info

Sequence conflict3131A → T in AAH04657. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: 1654A1E89438BC1D

FASTA48152,288
        10         20         30         40         50         60 
MAELQMLLEE EIPSGKRALI ESYQNLTRVA DYCENNYIQA TDKRKALEET KAYTTQSLAS 

        70         80         90        100        110        120 
VAYQINALAN NVLQLLDIQA SQLRRMESSI NHISQTVDIH KEKVARREIG ILTTNKNTSR 

       130        140        150        160        170        180 
THKIIAPANM ERPVRYIRKP IDYTVLDDVG HGVKWLKAKH GNNQPARTGT LSRTNPPTQK 

       190        200        210        220        230        240 
PPSPPVSGRG TLGRNTPYKT LEPVKPPTVP NDYMTSPARL GSQHSPGRTA SLNQRPRTHS 

       250        260        270        280        290        300 
GSSGGSGSRE NSGSSSIGIP IAVPTPSPPT AGPAAPGAAP GSQYGTMTRQ ISRHNSTTSS 

       310        320        330        340        350        360 
TSSGGYRRTP SVAAQFSAQP HVNGGPLYSQ NSISVAPPPP PMPQLTPQIP LTGFVARVQE 

       370        380        390        400        410        420 
NIADSPTPPP PPPPDDIPMF DDSPPPPPPP PVDYEDEEAA VVQYSDPYAD GDPAWAPKNY 

       430        440        450        460        470        480 
IEKVVAIYDY TKDKDDELSF KEGAIIYVIK KNDDGWFEGV CNRVTGLFPG NYVESIMHYT 


D 

« Hide

Isoform 2 (short).

Checksum: 805A2F6072F1D24B
Show »

FASTA44648,512
Isoform 3.

Checksum: B7E38AA1E9ED7FA6
Show »

FASTA47651,661
Isoform 4 (long).

Checksum: A0A613AAD091B0F0
Show »

FASTA47551,590
Isoform 5.

Checksum: 27FAB95E05BCA655
Show »

FASTA38842,548

References

« Hide 'large scale' references
[1]"Inhibition of v-Abl transformation in 3T3 cells overexpressing different forms of the Abelson interactor protein Abi-1."
Ikeguchi A., Yang H.-Y., Gao G., Goff S.P.
Oncogene 20:4926-4934(2001) [PubMed: 11526477] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 4), ALTERNATIVE SPLICING (ISOFORM 2), FUNCTION.
Strain: BALB/c.
[2]"t(10;11)-acute leukemias with MLL-AF10 and MLL-ABI1 chimeric transcripts: specific expression patterns of ABI1 gene in leukemia and solid tumor cell lines."
Shibuya N., Taki T., Mugishima H., Chin M., Tsuchida M., Sako M., Kawa K., Ishii E., Miura I., Yanagisawa M., Hayashi Y.
Genes Chromosomes Cancer 32:1-10(2001) [PubMed: 11477655] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
[3]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 5).
Strain: C57BL/6J.
Tissue: Bone marrow and Diencephalon.
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
[5]"Abl-interactor-1, a novel SH3 protein binding to the carboxy-terminal portion of the Abl protein, suppresses v-abl transforming activity."
Shi Y., Alin K., Goff S.P.
Genes Dev. 9:2583-2597(1995) [PubMed: 7590237] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 70-360 (ISOFORM 4), FUNCTION, PHOSPHORYLATION, TISSUE SPECIFICITY, INTERACTION WITH ABL1 AND V-ABL.
[6]"EPS8 and E3B1 transduce signals from Ras to Rac."
Scita G., Nordstrom J., Carbone R., Tenca P., Giardina G., Gutkind S., Bjarnegard M., Betsholtz C., Di Fiore P.P.
Nature 401:290-293(1999) [PubMed: 10499589] [Abstract]
Cited for: FUNCTION, IDENTIFICATION IN A COMPLEX WITH EPS8 AND SOS1.
[7]"Abl interactor 1 promotes tyrosine 296 phosphorylation of mammalian enabled (Mena) by c-Abl kinase."
Tani K., Sato S., Sukezane T., Kojima H., Hirose H., Hanafusa H., Shishido T.
J. Biol. Chem. 278:21685-21692(2003) [PubMed: 12672821] [Abstract]
Cited for: FUNCTION, INTERACTION WITH MENA.
[8]"Abl interactor 1 (Abi-1) wave-binding and SNARE domains regulate its nucleocytoplasmic shuttling, lamellipodium localization, and wave-1 levels."
Echarri A., Lai M.J., Robinson M.R., Pendergast A.M.
Mol. Cell. Biol. 24:4979-4993(2004) [PubMed: 15143189] [Abstract]
Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH STX1A; SNAP25; VAMP2 AND WASF1.
[9]"Localization and phosphorylation of Abl-interactor proteins, Abi-1 and Abi-2, in the developing nervous system."
Courtney K.D., Grove M., Vandongen H., Vandongen A., LaMantia A.-S., Pendergast A.M.
Mol. Cell. Neurosci. 16:244-257(2000) [PubMed: 10995551] [Abstract]
Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
[10]"The Abl interactor proteins localize to sites of actin polymerization at the tips of lamellipodia and filopodia."
Stradal T.E.B., Courtney K.D., Rottner K., Hahne P., Small J.V., Pendergast A.M.
Curr. Biol. 11:891-895(2001) [PubMed: 11516653] [Abstract]
Cited for: SUBCELLULAR LOCATION.
[11]"Sra-1 and Nap1 link Rac to actin assembly driving lamellipodia formation."
Steffen A., Rottner K., Ehinger J., Innocenti M., Scita G., Wehland J., Stradal T.E.B.
EMBO J. 23:749-759(2004) [PubMed: 14765121] [Abstract]
Cited for: COMPONENT OF WAVE2 COMPLEX.
Strain: C57BL/6.
Tissue: Brain.
[12]"Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks."
Wolf-Yadlin A., Hautaniemi S., Lauffenburger D.A., White F.M.
Proc. Natl. Acad. Sci. U.S.A. 104:5860-5865(2007) [PubMed: 17389395] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-213, MASS SPECTROMETRY.
[13]"Large-scale identification and evolution indexing of tyrosine phosphorylation sites from murine brain."
Ballif B.A., Carey G.R., Sunyaev S.R., Gygi S.P.
J. Proteome Res. 7:311-318(2008) [PubMed: 18034455] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-428, MASS SPECTROMETRY.
Tissue: Brain.
[14]"Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations."
Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F., Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D., Gerrits B., Panse C., Schlapbach R., Mansuy I.M.
Mol. Cell. Proteomics 6:283-293(2007) [PubMed: 17114649] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183, MASS SPECTROMETRY.
Tissue: Brain cortex.
[15]"Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry."
Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J., Faessler R., Mann M.
J. Proteome Res. 7:5314-5326(2008) [PubMed: 18973353] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183 AND SER-222, MASS SPECTROMETRY.
[16]"The phagosomal proteome in interferon-gamma-activated macrophages."
Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
Immunity 30:143-154(2009) [PubMed: 19144319] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183 AND SER-222, MASS SPECTROMETRY.
Tissue: Macrophage.
[17]"Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry."
Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J.
Mol. Cell. Proteomics 8:904-912(2009) [PubMed: 19131326] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-183 AND TYR-213, MASS SPECTROMETRY.
+Additional computationally mapped references.

Cross-references

Sequence databases

AF420251 mRNA. Translation: AAL16036.1.
AY033645 mRNA. Translation: AAK59381.1.
AK034476 mRNA. Translation: BAC28722.1.
AK152061 mRNA. Translation: BAE30917.1.
AK152184 mRNA. Translation: BAE31015.1.
AK151026 mRNA. Translation: BAE30044.1.
BC004657 mRNA. Translation: AAH04657.1.
U17698 mRNA. Translation: AAB00373.1. Sequence problems.
IPIIPI00454179.
IPI00551347.
IPI00653749.
IPI00659927.
IPI00798483.
RefSeqNP_001070658.1.
NP_001070660.1.
NP_001070661.1.
NP_031406.2.
UniGeneMm.205647
Mm.249752

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ8CBW3. 22 interactions.
STRINGQ8CBW3.

PTM databases

PhosphoSiteQ8CBW3.

Proteomic databases

PRIDEQ8CBW3.

Genome annotation databases

EnsemblENSMUST00000078977; ENSMUSP00000077997; ENSMUSG00000058835; Mus musculus. [Genome view]
ENSMUST00000091394; ENSMUSP00000088957; ENSMUSG00000058835; Mus musculus. [Genome view]
ENSMUST00000093171; ENSMUSP00000090860; ENSMUSG00000058835; Mus musculus. [Genome view]
ENSMUST00000114544; ENSMUSP00000110191; ENSMUSG00000058835; Mus musculus. [Genome view]
GeneID11308.
KEGGmmu:11308.
UCSCuc008ins.1. mouse.
uc008int.1. mouse.
uc008inu.1. mouse.
uc008inv.1. mouse.

Organism-specific databases

CTD11308.
MGIMGI:104913. Abi1.

Phylogenomic databases

HOGENOMQ8CBW3.
HOVERGENQ8CBW3.
OMAIADSPTP

Gene expression databases

ArrayExpressQ8CBW3.
BgeeQ8CBW3.
CleanExMM_ABI1.
GenevestigatorQ8CBW3.

Family and domain databases

InterProIPR012849. Abl-interactor_HHR.
IPR000108. Neu_cyt_fact_2.
IPR001452. SH3_domain.
IPR020473. SH3_region.
IPR000727. T_SNARE.
[Graphical view]
PfamPF07815. Abi_HHR. 1 hit.
PF00018. SH3_1. 1 hit.
[Graphical view]
PRINTSPR00499. P67PHOX.
PR00452. SH3DOMAIN.
SMARTSM00326. SH3. 1 hit.
[Graphical view]
PROSITEPS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio278608.
SOURCESearch...

Entry information

Entry nameABI1_MOUSE
AccessionPrimary (citable) accession number: Q8CBW3
Secondary accession number(s): Q3U8V0 expand/collapse secondary AC list , Q60747, Q91ZM5, Q923I9, Q99KH4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: November 24, 2009
This is version 81 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents