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Q8CBD0

- Q8CBD0_MOUSE

UniProt

Q8CBD0 - Q8CBD0_MOUSE

Protein
Submitted name:

Protein NDRG3

Gene

Ndrg3

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein NDRG3Imported
    Gene namesi
    Name:Ndrg3Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 2

    Organism-specific databases

    MGIiMGI:1352499. Ndrg3.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl

    Expressioni

    Gene expression databases

    GenevestigatoriQ8CBD0.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000070052.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000001874.
    HOGENOMiHOG000230891.
    HOVERGENiHBG052591.
    InParanoidiQ8CBD0.

    Family and domain databases

    Gene3Di3.40.50.1820. 1 hit.
    InterProiIPR029058. AB_hydrolase.
    IPR004142. NDRG.
    [Graphical view]
    PANTHERiPTHR11034. PTHR11034. 1 hit.
    PfamiPF03096. Ndr. 1 hit.
    [Graphical view]
    SUPFAMiSSF53474. SSF53474. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8CBD0-1 [UniParc]FASTAAdd to Basket

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    MDELQDVQLT EIKPLLNDKN GTRNFQDFDC QEHDIETPHG MVHVTIRGLP    50
    KGNRPVILTY HDIGLNHKSC FNTFFNFEDM QEITQHFAVC HVDAPGQQEA 100
    APSFPTGYQY PTMDELAEML PPVLTHLSMK SIIGIGVGAG AYILSRFALN 150
    HPELVEGLVL INIDPCAKGW IDWAASKLSG FTTNIVDIIL AHHFGQEELQ 200
    ANLDLIQTYR LHIAQDINQE NLQLFLGSYN GRRDLEIERP ILGQNDNRLK 250
    TLK 253
    Length:253
    Mass (Da):28,583
    Last modified:March 1, 2003 - v1
    Checksum:i568DC7F547BDF0A3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL669932 Genomic DNA. No translation available.
    AL935150 Genomic DNA. No translation available.
    AK036277 mRNA. Translation: BAC29369.1.
    UniGeneiMm.279256.

    Genome annotation databases

    EnsembliENSMUST00000109558; ENSMUSP00000105185; ENSMUSG00000027634.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL669932 Genomic DNA. No translation available.
    AL935150 Genomic DNA. No translation available.
    AK036277 mRNA. Translation: BAC29369.1 .
    UniGenei Mm.279256.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000070052.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000109558 ; ENSMUSP00000105185 ; ENSMUSG00000027634 .

    Organism-specific databases

    MGIi MGI:1352499. Ndrg3.

    Phylogenomic databases

    GeneTreei ENSGT00390000001874.
    HOGENOMi HOG000230891.
    HOVERGENi HBG052591.
    InParanoidi Q8CBD0.

    Miscellaneous databases

    ChiTaRSi NDRG3. mouse.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q8CBD0.

    Family and domain databases

    Gene3Di 3.40.50.1820. 1 hit.
    InterProi IPR029058. AB_hydrolase.
    IPR004142. NDRG.
    [Graphical view ]
    PANTHERi PTHR11034. PTHR11034. 1 hit.
    Pfami PF03096. Ndr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53474. SSF53474. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    10. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ8CBD0_MOUSE
    AccessioniPrimary (citable) accession number: Q8CBD0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3