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Q8CAT6

- Q8CAT6_MOUSE

UniProt

Q8CAT6 - Q8CAT6_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Egr1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. BMP signaling pathway Source: MGI
    2. cellular response to cAMP Source: RefGenome
    3. cellular response to gonadotropin stimulus Source: RefGenome
    4. cellular response to organic substance Source: MGI
    5. negative regulation of apoptotic process Source: RefGenome
    6. negative regulation of transcription from RNA polymerase II promoter Source: MGI
    7. positive regulation of transcription, DNA-templated Source: MGI
    8. regulation of long-term neuronal synaptic plasticity Source: RefGenome
    9. regulation of transcription, DNA-templated Source: MGI
    10. skeletal muscle cell differentiation Source: MGI
    11. T cell differentiation Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Egr1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:95295. Egr1.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: RefGenome
    2. nucleus Source: MGI

    PTM / Processingi

    Proteomic databases

    PRIDEiQ8CAT6.

    Expressioni

    Gene expression databases

    GenevestigatoriQ8CAT6.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000069616.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8CAT6.
    SMRiQ8CAT6. Positions 333-419.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG003909.
    InParanoidiQ8CAT6.
    KOiK09203.

    Family and domain databases

    Gene3Di3.30.160.60. 3 hits.
    InterProiIPR021839. DUF3432.
    IPR021849. DUF3446.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF11914. DUF3432. 1 hit.
    PF11928. DUF3446. 1 hit.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 3 hits.
    [Graphical view]
    PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
    PS50157. ZINC_FINGER_C2H2_2. 3 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8CAT6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAAKAEMQL MSPLQISDPF GSFPHSPTMD NYPKLEEMML LSNGAPQFLG    50
    AAGTPEGSGG NSSSSTSSGG GGGGGSNSGS SAFNPQGEPS EQPYEHLTTE 100
    SFSDIALNNE KAMVETSYPS QTTRLPPITY TGRFSLEPAP NSGNTLWPEP 150
    LFSLVSGLVS MTNPPTSSSS APSPAASSSS SASQSPPLSC AVPSNDSSPI 200
    YSAAPTFPTP NTDIFPEPQS QAFPGSAGTA LQYPPPAYPA TKGGFQVPMI 250
    PDYLFPQQQG DLSLGTPDQK PFQGLENRTQ QPSLTPLSTI KAFATQSGSQ 300
    DLKALNTTYQ SQLIKPSRMR KYPNRPSKTP PHERPYACPV ESCDRHFSRS 350
    DELTRHIRIH TGQKPFQCRI CMRNFSRSDH LTTHIRTHTG EKPFACDICG 400
    RKFARSDERK RHTKIHLRQK DKKADKSVVA SPAASSLSSY PSPVATSYPS 450
    PATTSFPSPV PTSYSSPGSS TYPSPAHSGF PSPSVATTFA SVPPAFPTQV 500
    SSFPSAGVSS SFSTSTGLSD MTATFSPRTI EIC 533
    Length:533
    Mass (Da):56,571
    Last modified:March 1, 2003 - v1
    Checksum:iA10386B89DC15FE0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK037837 mRNA. Translation: BAC29885.1.
    RefSeqiNP_031939.1. NM_007913.5.
    UniGeneiMm.181959.

    Genome annotation databases

    GeneIDi13653.
    KEGGimmu:13653.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK037837 mRNA. Translation: BAC29885.1 .
    RefSeqi NP_031939.1. NM_007913.5.
    UniGenei Mm.181959.

    3D structure databases

    ProteinModelPortali Q8CAT6.
    SMRi Q8CAT6. Positions 333-419.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000069616.

    Proteomic databases

    PRIDEi Q8CAT6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 13653.
    KEGGi mmu:13653.

    Organism-specific databases

    CTDi 1958.
    MGIi MGI:95295. Egr1.

    Phylogenomic databases

    HOVERGENi HBG003909.
    InParanoidi Q8CAT6.
    KOi K09203.

    Miscellaneous databases

    NextBioi 284384.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q8CAT6.

    Family and domain databases

    Gene3Di 3.30.160.60. 3 hits.
    InterProi IPR021839. DUF3432.
    IPR021849. DUF3446.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF11914. DUF3432. 1 hit.
    PF11928. DUF3446. 1 hit.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 3 hits.
    [Graphical view ]
    PROSITEi PS00028. ZINC_FINGER_C2H2_1. 3 hits.
    PS50157. ZINC_FINGER_C2H2_2. 3 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.

    Entry informationi

    Entry nameiQ8CAT6_MOUSE
    AccessioniPrimary (citable) accession number: Q8CAT6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 82 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)