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Protein
Submitted name:

Rad23a protein

Gene

Rad23a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Rad23a proteinImported
Submitted name:
UV excision repair protein RAD23 homolog AImported
Gene namesi
Name:Rad23aImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 8

Organism-specific databases

MGIiMGI:105126. Rad23a.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000003813.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000003911.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 8179Ubiquitin-likeInterPro annotationAdd
BLAST
Domaini161 – 20141UBAInterPro annotationAdd
BLAST
Domaini317 – 35741UBAInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0011. Eukaryota.
COG5272. LUCA.
GeneTreeiENSGT00390000012078.
HOVERGENiHBG055042.
KOiK10839.
TreeFamiTF101216.

Family and domain databases

Gene3Di1.10.10.540. 1 hit.
InterProiIPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR015940. UBA.
IPR009060. UBA-like.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
IPR015360. XPC-bd.
[Graphical view]
PfamiPF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
[Graphical view]
PRINTSiPR01839. RAD23PROTEIN.
SMARTiSM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
SSF54236. SSF54236. 1 hit.
TIGRFAMsiTIGR00601. rad23. 1 hit.
PROSITEiPS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8CAP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVTITLKTL QQQTFKIRME PDETVKVLKE KIEAEKGRDA FPVAGQKLIY
60 70 80 90 100
AGKILSDDVP IKEYHIDEKN FVVVMVTKAK AGQGIPAPPE ASPTAVPEPS
110 120 130 140 150
TPFPPVLASG MSHPPPTSRE DKSPSEESTT TTSPESISGS VPSSGSSGRE
160 170 180 190 200
EDAASTLVTG SEYETMLTEI MSMGYERERV VAALRASYNN PHRAVEYLLT
210 220 230 240 250
GIPGSPEPEH GSVQESQAPE QPATEAGENP LEFLRDQPQF QNMRQVIQQN
260 270 280 290 300
PALLPALLQQ LGQENPQLLQ QISRHQEQFI QMLNEPPGEL ADISDVEGEV
310 320 330 340 350
GAIGEEAPQM NYIQVTPQEK EAIERLKALG FPESLVIQAY FACEKNENLA
360
ANFLLSQNFD DE
Length:362
Mass (Da):39,635
Last modified:March 1, 2003 - v1
Checksum:i804B2608ECA241A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC155163 Genomic DNA. No translation available.
BC138684 mRNA. Translation: AAI38685.1.
AK038300 mRNA. Translation: BAC29962.1.
RefSeqiNP_001284535.1. NM_001297606.1.
NP_001284536.1. NM_001297607.1.
NP_033036.2. NM_009010.5.
UniGeneiMm.255539.

Genome annotation databases

EnsembliENSMUST00000003911; ENSMUSP00000003911; ENSMUSG00000003813.
GeneIDi19358.
KEGGimmu:19358.
UCSCiuc009mnk.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC155163 Genomic DNA. No translation available.
BC138684 mRNA. Translation: AAI38685.1.
AK038300 mRNA. Translation: BAC29962.1.
RefSeqiNP_001284535.1. NM_001297606.1.
NP_001284536.1. NM_001297607.1.
NP_033036.2. NM_009010.5.
UniGeneiMm.255539.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000003911.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000003911; ENSMUSP00000003911; ENSMUSG00000003813.
GeneIDi19358.
KEGGimmu:19358.
UCSCiuc009mnk.2. mouse.

Organism-specific databases

CTDi5886.
MGIiMGI:105126. Rad23a.

Phylogenomic databases

eggNOGiKOG0011. Eukaryota.
COG5272. LUCA.
GeneTreeiENSGT00390000012078.
HOVERGENiHBG055042.
KOiK10839.
TreeFamiTF101216.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000003813.

Family and domain databases

Gene3Di1.10.10.540. 1 hit.
InterProiIPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR015940. UBA.
IPR009060. UBA-like.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
IPR015360. XPC-bd.
[Graphical view]
PfamiPF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
[Graphical view]
PRINTSiPR01839. RAD23PROTEIN.
SMARTiSM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
SSF54236. SSF54236. 1 hit.
TIGRFAMsiTIGR00601. rad23. 1 hit.
PROSITEiPS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8CAP3_MOUSE
AccessioniPrimary (citable) accession number: Q8CAP3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: September 7, 2016
This is version 120 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.