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Q8CAG2

- Q8CAG2_MOUSE

UniProt

Q8CAG2 - Q8CAG2_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Ercc5

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 2 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. endonuclease activity Source: InterPro
    2. single-stranded DNA binding Source: InterPro

    GO - Biological processi

    1. determination of adult lifespan Source: MGI
    2. DNA repair Source: MGI
    3. multicellular organism growth Source: MGI
    4. nucleotide-excision repair Source: MGI
    5. response to UV Source: MGI
    6. UV protection Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Ercc5Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:103582. Ercc5.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ8CAG2.

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG054810.

    Family and domain databases

    Gene3Di3.40.50.1010. 1 hit.
    InterProiIPR029060. PIN_domain-like.
    IPR001044. XPG/Rad2_eukaryotes.
    IPR019974. XPG_CS.
    IPR006085. XPG_DNA_repair_N.
    [Graphical view]
    PANTHERiPTHR11081:SF1. PTHR11081:SF1. 1 hit.
    PfamiPF00752. XPG_N. 1 hit.
    [Graphical view]
    PRINTSiPR00066. XRODRMPGMNTG.
    SMARTiSM00485. XPGN. 1 hit.
    [Graphical view]
    SUPFAMiSSF88723. SSF88723. 1 hit.
    PROSITEiPS00841. XPG_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q8CAG2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGVQGLWKLL ECSGHRVSPE ALEGKVLAVD ISIWLNQALK GVRDSHGNVI    50
    ENAHLLTLFH RLCKLLFFRI RPIFVFDGDA PLLKKQTLAK RRQRKDSASI 100
    DSRKTTEKLL KTFLKRQALK TAFRSSRHEA PPSLTQVQRQ DDIYVLPPLP 150
    EEEKHSSEEE DEKQWQARMD QKQALQEEFF HNPQAIDIES EDFSSLPPEV 200
    KHEILTDMKE FTKRRRTLFE AMPESVIMPC MLIPVLWRQR QKDLHNFKAS 250
    MFYIVISWLA WATYWKTVST RTTA 274
    Length:274
    Mass (Da):32,039
    Last modified:October 11, 2005 - v2
    Checksum:i7325E60AEEBCB37C
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei274 – 2741Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK038822 mRNA. Translation: BAC30139.2.
    UniGeneiMm.2213.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK038822 mRNA. Translation: BAC30139.2 .
    UniGenei Mm.2213.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:103582. Ercc5.

    Phylogenomic databases

    HOVERGENi HBG054810.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q8CAG2.

    Family and domain databases

    Gene3Di 3.40.50.1010. 1 hit.
    InterProi IPR029060. PIN_domain-like.
    IPR001044. XPG/Rad2_eukaryotes.
    IPR019974. XPG_CS.
    IPR006085. XPG_DNA_repair_N.
    [Graphical view ]
    PANTHERi PTHR11081:SF1. PTHR11081:SF1. 1 hit.
    Pfami PF00752. XPG_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00066. XRODRMPGMNTG.
    SMARTi SM00485. XPGN. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88723. SSF88723. 1 hit.
    PROSITEi PS00841. XPG_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HypothalamusImported.

    Entry informationi

    Entry nameiQ8CAG2_MOUSE
    AccessioniPrimary (citable) accession number: Q8CAG2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 63 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)