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Q8CAG2

- Q8CAG2_MOUSE

UniProt

Q8CAG2 - Q8CAG2_MOUSE

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Protein
Submitted name:

Putative uncharacterized protein

Gene
Ercc5
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. endonuclease activity Source: InterPro
  2. single-stranded DNA binding Source: InterPro

GO - Biological processi

  1. determination of adult lifespan Source: MGI
  2. DNA repair Source: MGI
  3. multicellular organism growth Source: MGI
  4. nucleotide-excision repair Source: MGI
  5. response to UV Source: MGI
  6. UV protection Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Ercc5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:103582. Ercc5.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ8CAG2.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG054810.

Family and domain databases

Gene3Di3.40.50.1010. 1 hit.
InterProiIPR029060. PIN_domain-like.
IPR001044. XPG/Rad2_eukaryotes.
IPR019974. XPG_CS.
IPR006085. XPG_DNA_repair_N.
[Graphical view]
PANTHERiPTHR11081:SF1. PTHR11081:SF1. 1 hit.
PfamiPF00752. XPG_N. 1 hit.
[Graphical view]
PRINTSiPR00066. XRODRMPGMNTG.
SMARTiSM00485. XPGN. 1 hit.
[Graphical view]
SUPFAMiSSF88723. SSF88723. 1 hit.
PROSITEiPS00841. XPG_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8CAG2-1 [UniParc]FASTAAdd to Basket

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MGVQGLWKLL ECSGHRVSPE ALEGKVLAVD ISIWLNQALK GVRDSHGNVI    50
ENAHLLTLFH RLCKLLFFRI RPIFVFDGDA PLLKKQTLAK RRQRKDSASI 100
DSRKTTEKLL KTFLKRQALK TAFRSSRHEA PPSLTQVQRQ DDIYVLPPLP 150
EEEKHSSEEE DEKQWQARMD QKQALQEEFF HNPQAIDIES EDFSSLPPEV 200
KHEILTDMKE FTKRRRTLFE AMPESVIMPC MLIPVLWRQR QKDLHNFKAS 250
MFYIVISWLA WATYWKTVST RTTA 274
Length:274
Mass (Da):32,039
Last modified:October 11, 2005 - v2
Checksum:i7325E60AEEBCB37C
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei274 – 2741Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK038822 mRNA. Translation: BAC30139.2.
UniGeneiMm.2213.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK038822 mRNA. Translation: BAC30139.2 .
UniGenei Mm.2213.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

MGIi MGI:103582. Ercc5.

Phylogenomic databases

HOVERGENi HBG054810.

Miscellaneous databases

SOURCEi Search...

Gene expression databases

Genevestigatori Q8CAG2.

Family and domain databases

Gene3Di 3.40.50.1010. 1 hit.
InterProi IPR029060. PIN_domain-like.
IPR001044. XPG/Rad2_eukaryotes.
IPR019974. XPG_CS.
IPR006085. XPG_DNA_repair_N.
[Graphical view ]
PANTHERi PTHR11081:SF1. PTHR11081:SF1. 1 hit.
Pfami PF00752. XPG_N. 1 hit.
[Graphical view ]
PRINTSi PR00066. XRODRMPGMNTG.
SMARTi SM00485. XPGN. 1 hit.
[Graphical view ]
SUPFAMi SSF88723. SSF88723. 1 hit.
PROSITEi PS00841. XPG_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HypothalamusImported.

Entry informationi

Entry nameiQ8CAG2_MOUSE
AccessioniPrimary (citable) accession number: Q8CAG2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: October 11, 2005
Last modified: June 11, 2014
This is version 62 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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