false
2003-03-01
2024-03-27
154
Q8C8Q4_MOUSE
High-efficiency full-length cDNA cloning.
Carninci P.
Hayashizaki Y.
doi:10.1016/S0076-6879(99)03004-9
1999
Methods Enzymol.
303
19-44
NUCLEOTIDE SEQUENCE
C57BL/6J
Retina
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.
Carninci P.
Shibata Y.
Hayatsu N.
Sugahara Y.
Shibata K.
Itoh M.
Konno H.
Okazaki Y.
Muramatsu M.
Hayashizaki Y.
doi:10.1101/gr.145100
2000
Genome Res.
10
1617-1630
NUCLEOTIDE SEQUENCE
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
Shibata K.
Itoh M.
Aizawa K.
Nagaoka S.
Sasaki N.
Carninci P.
Konno H.
Akiyama J.
Nishi K.
Kitsunai T.
Tashiro H.
Itoh M.'
Sumi N.
Ishii Y.
Nakamura S.
Hazama M.
Nishine T.
Harada A.
Yamamoto R.
Matsumoto H.
Sakaguchi S.
Ikegami T.
Kashiwagi K.
Fujiwake S.
Inoue K.
Togawa Y.
Izawa M.
Ohara E.
Watahiki M.
Yoneda Y.
Ishikawa T.
Ozawa K.
Tanaka T.
Matsuura S.
Kawai J.
Okazaki Y.
Muramatsu M.
Inoue Y.
Kira A.
Hayashizaki Y.
doi:10.1101/gr.152600
2000
Genome Res.
10
1757-1771
NUCLEOTIDE SEQUENCE
Functional annotation of a full-length mouse cDNA collection.
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
doi:10.1038/35055500
2001
Nature
409
685-690
NUCLEOTIDE SEQUENCE
Adachi J.
Aizawa K.
Akimura T.
Arakawa T.
Bono H.
Carninci P.
Fukuda S.
Furuno M.
Hanagaki T.
Hara A.
Hashizume W.
Hayashida K.
Hayatsu N.
Hiramoto K.
Hiraoka T.
Hirozane T.
Hori F.
Imotani K.
Ishii Y.
Itoh M.
Kagawa I.
Kasukawa T.
Katoh H.
Kawai J.
Kojima Y.
Kondo S.
Konno H.
Kouda M.
Koya S.
Kurihara C.
Matsuyama T.
Miyazaki A.
Murata M.
Nakamura M.
Nishi K.
Nomura K.
Numazaki R.
Ohno M.
Ohsato N.
Okazaki Y.
Saito R.
Saitoh H.
Sakai C.
Sakai K.
Sakazume N.
Sano H.
Sasaki D.
Shibata K.
Shinagawa A.
Shiraki T.
Sogabe Y.
Tagami M.
Tagawa A.
Takahashi F.
Takaku-Akahira S.
Takeda Y.
Tanaka T.
Tomaru A.
Toya T.
Yasunishi A.
Muramatsu M.
Hayashizaki Y.
2001-07
EMBL/GenBank/DDBJ
NUCLEOTIDE SEQUENCE
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
doi:10.1038/nature01266
2002
Nature
420
563-573
NUCLEOTIDE SEQUENCE
The Transcriptional Landscape of the Mammalian Genome.
The FANTOM Consortium
Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
2005
Science
309
1559-1563
NUCLEOTIDE SEQUENCE
Antisense Transcription in the Mammalian Transcriptome.
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
doi:10.1126/science.1112009
2005
Science
309
1564-1566
NUCLEOTIDE SEQUENCE
Lineage-specific biology revealed by a finished genome assembly of the mouse.
Church D.M.
Goodstadt L.
Hillier L.W.
Zody M.C.
Goldstein S.
She X.
Bult C.J.
Agarwala R.
Cherry J.L.
DiCuccio M.
Hlavina W.
Kapustin Y.
Meric P.
Maglott D.
Birtle Z.
Marques A.C.
Graves T.
Zhou S.
Teague B.
Potamousis K.
Churas C.
Place M.
Herschleb J.
Runnheim R.
Forrest D.
Amos-Landgraf J.
Schwartz D.C.
Cheng Z.
Lindblad-Toh K.
Eichler E.E.
Ponting C.P.
doi:10.1371/journal.pbio.1000112
2009
PLoS Biol.
7
E1000112
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
Ensembl
2023-11
UniProtKB
IDENTIFICATION
123 antibodies from 19 providers
mouse
Cacna1f
Expressed in retinal neural layer and 12 other cell types or tissues
Voltage-gated potassium channels. Chain C
Ion_trans_dom
VDCC_L_a1su
VDCCAlpha1
Volt_channel_dom_sf
VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1
VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT ALPHA-1F
Ion_trans
CACHANNEL
LVDCCALPHA1
Voltage-gated potassium channels
Voltage-dependent L-type calcium channel subunit alpha
Cacna1f
Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death.
Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
Helical
96
113
Helical
133
152
Helical
164
180
Helical
237
260
Helical
316
337
Helical
349
371
Helical
530
548
Helical
563
581
Helical
659
678
Helical
728
750
Ion transport
92
382
Ion transport
531
763
Disordered
1
56
Disordered
455
490
Disordered
766
786
Polar residues
456
479
Basic and acidic residues
768
783
330
711
N-linked (GlcNAc...) asparagine
295
844
2003-03-01
1
single
94124
e349e1b1c50940f310e4dbba37f891fe
MSESEVGKDTTPEPSPANGTGPGPEWGLCPGPPTVGTDTSGASGLGTPRRRTQHNKHKTVAVASAQRSPRALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQVEYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQGPGRPGDAPHTGGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLELFLGRMHKTCYFLGSDMEAEEDPSPCASSGSGRSCTLNHTECRGRWPGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLRGYLDWITQAEELDLHDPSVDGNLASLAEEGRAGHRPQLSELTNRRRGRLRWFSHSTRSTHSTSSHASLPASDTGSMTDTPGDEDEEEGTMASCTRCLNKIMKTRICRHFRRANRGLRARCRRAVKSNACYWAVLLLVFLNTLTIASEHHGQPLWLTQTQEYANKVLLCLFTVEMLLKLYGLGPSVYVASFFNRFDCFVVCGGILETTLVEVGAMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRSTFDTFPQALLTVFQILTGEDWNVVMYDGIMAYGGPFFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLASGDAGTAKDKGREKSSEGNPPKENKVLDLNWFPDPCQVDHNYLQLQVQEIQCLWPPDLKSHLHSHTHTHTWILVIENNKAKS