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Protein

Solute carrier family 35 member E2

Gene

Slc35e2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Putative transporter.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Solute carrier family 35 member E2
Gene namesi
Name:Slc35e2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:2444240. Slc35e2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei76 – 9621HelicalSequence analysisAdd
BLAST
Transmembranei106 – 12621HelicalSequence analysisAdd
BLAST
Transmembranei142 – 16221HelicalSequence analysisAdd
BLAST
Transmembranei167 – 18721HelicalSequence analysisAdd
BLAST
Transmembranei195 – 21521HelicalSequence analysisAdd
BLAST
Transmembranei219 – 24123HelicalSequence analysisAdd
BLAST
Transmembranei264 – 28421HelicalSequence analysisAdd
BLAST
Transmembranei296 – 31621HelicalSequence analysisAdd
BLAST
Transmembranei326 – 34621HelicalSequence analysisAdd
BLAST
Transmembranei347 – 36721HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 405405Solute carrier family 35 member E2PRO_0000305058Add
BLAST

Proteomic databases

MaxQBiQ8C811.
PaxDbiQ8C811.
PRIDEiQ8C811.

PTM databases

PhosphoSiteiQ8C811.

Expressioni

Gene expression databases

BgeeiQ8C811.
CleanExiMM_A530082C11RIK.
GenevisibleiQ8C811. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000041449.

Structurei

3D structure databases

ProteinModelPortaliQ8C811.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1441. Eukaryota.
ENOG410XP1S. LUCA.
GeneTreeiENSGT00530000063705.
HOGENOMiHOG000007662.
HOVERGENiHBG104970.
InParanoidiQ8C811.
KOiK15284.
OMAiIYLTLWF.
OrthoDBiEOG75TMC4.
PhylomeDBiQ8C811.
TreeFamiTF331257.

Family and domain databases

InterProiIPR004853. Sugar_P_trans_dom.
[Graphical view]
PfamiPF03151. TPT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8C811-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAAAKSQVP EEAAPGCEEE PKGKTLLTWG SLFGHRSEKI VFTKGDGSPE
60 70 80 90 100
ESLLTVTITE TTVIESDLGV WSSRALIYLT LWFFFSFCTL FLNKYILSLL
110 120 130 140 150
EGEPSMLGAV QMLSTTLIGC VKIFVPCCLY QHKTRLSYPP NFIMTMLFVG
160 170 180 190 200
LMRFATVVLG LVSLKNVAVS FAETVKSSAP IFTVIMSRMI LGEYTGLLVN
210 220 230 240 250
LSLIPVMGGL ALCTATEISF NILGFSAALS TNIMDCLQNV FSKKLLSGDK
260 270 280 290 300
YRFSAPELQF YTSAAAVALL IPAWTFFMDI PVIGRSGKSF SYSQDIVLLL
310 320 330 340 350
LTDGALFHLQ SVTAYALMGK ISPVTFSVAS TVKHALSIWL SIIVFGNKIT
360 370 380 390 400
SLSAIGTILV TLGVLLYNKA RQYQQETMQS LVTATSRNPE DDTEPLVPQD

SRQHH
Length:405
Mass (Da):44,279
Last modified:March 1, 2003 - v1
Checksum:iBBAE003CFF0189B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK048716 mRNA. Translation: BAC33431.1.
AK145065 mRNA. Translation: BAE26216.1.
AK157354 mRNA. Translation: BAE34060.1.
AL627405 Genomic DNA. Translation: CAM16744.1.
BC058728 mRNA. Translation: AAH58728.1.
CCDSiCCDS38995.1.
RefSeqiNP_796160.1. NM_177186.4.
XP_006539015.1. XM_006538952.2.
XP_006539016.1. XM_006538953.2.
UniGeneiMm.306018.
Mm.489769.

Genome annotation databases

EnsembliENSMUST00000043829; ENSMUSP00000041449; ENSMUSG00000042202.
ENSMUST00000105608; ENSMUSP00000101233; ENSMUSG00000042202.
ENSMUST00000118607; ENSMUSP00000113189; ENSMUSG00000042202.
GeneIDi320541.
KEGGimmu:320541.
UCSCiuc008wdw.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK048716 mRNA. Translation: BAC33431.1.
AK145065 mRNA. Translation: BAE26216.1.
AK157354 mRNA. Translation: BAE34060.1.
AL627405 Genomic DNA. Translation: CAM16744.1.
BC058728 mRNA. Translation: AAH58728.1.
CCDSiCCDS38995.1.
RefSeqiNP_796160.1. NM_177186.4.
XP_006539015.1. XM_006538952.2.
XP_006539016.1. XM_006538953.2.
UniGeneiMm.306018.
Mm.489769.

3D structure databases

ProteinModelPortaliQ8C811.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000041449.

PTM databases

PhosphoSiteiQ8C811.

Proteomic databases

MaxQBiQ8C811.
PaxDbiQ8C811.
PRIDEiQ8C811.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000043829; ENSMUSP00000041449; ENSMUSG00000042202.
ENSMUST00000105608; ENSMUSP00000101233; ENSMUSG00000042202.
ENSMUST00000118607; ENSMUSP00000113189; ENSMUSG00000042202.
GeneIDi320541.
KEGGimmu:320541.
UCSCiuc008wdw.2. mouse.

Organism-specific databases

CTDi9906.
MGIiMGI:2444240. Slc35e2.

Phylogenomic databases

eggNOGiKOG1441. Eukaryota.
ENOG410XP1S. LUCA.
GeneTreeiENSGT00530000063705.
HOGENOMiHOG000007662.
HOVERGENiHBG104970.
InParanoidiQ8C811.
KOiK15284.
OMAiIYLTLWF.
OrthoDBiEOG75TMC4.
PhylomeDBiQ8C811.
TreeFamiTF331257.

Miscellaneous databases

PROiQ8C811.
SOURCEiSearch...

Gene expression databases

BgeeiQ8C811.
CleanExiMM_A530082C11RIK.
GenevisibleiQ8C811. MM.

Family and domain databases

InterProiIPR004853. Sugar_P_trans_dom.
[Graphical view]
PfamiPF03151. TPT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J and NOD.
    Tissue: Cerebellum, Mammary gland and Spleen.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Brain.

Entry informationi

Entry nameiS35E2_MOUSE
AccessioniPrimary (citable) accession number: Q8C811
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 2, 2007
Last sequence update: March 1, 2003
Last modified: June 8, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.