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Protein

BTB/POZ domain-containing protein 9

Gene

Btbd9

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  • adult locomotory behavior Source: MGI
  • circadian behavior Source: MGI
  • circadian sleep/wake cycle, non-REM sleep Source: MGI
  • long-term memory Source: MGI
  • multicellular organismal iron ion homeostasis Source: MGI
  • regulation of synaptic vesicle endocytosis Source: MGI
  • sensory perception of temperature stimulus Source: MGI
  • serotonin metabolic process Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
BTB/POZ domain-containing protein 9
Gene namesi
Name:Btbd9
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 17

Organism-specific databases

MGIiMGI:1916625. Btbd9.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 612612BTB/POZ domain-containing protein 9PRO_0000186218Add
BLAST

Proteomic databases

EPDiQ8C726.
MaxQBiQ8C726.
PaxDbiQ8C726.
PRIDEiQ8C726.

PTM databases

iPTMnetiQ8C726.
PhosphoSiteiQ8C726.

Expressioni

Gene expression databases

BgeeiQ8C726.
CleanExiMM_BTBD9.
GenevisibleiQ8C726. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000078845.

Structurei

3D structure databases

ProteinModelPortaliQ8C726.
SMRiQ8C726. Positions 22-250.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini36 – 10469BTBPROSITE-ProRule annotationAdd
BLAST
Domaini142 – 24099BACKAdd
BLAST

Sequence similaritiesi

Contains 1 BTB (POZ) domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG4350. Eukaryota.
ENOG410Z7D9. LUCA.
GeneTreeiENSGT00550000074511.
HOGENOMiHOG000007577.
HOVERGENiHBG050744.
InParanoidiQ8C726.
KOiK10481.
OMAiIINHIRL.
OrthoDBiEOG71P29D.
PhylomeDBiQ8C726.
TreeFamiTF318638.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
InterProiIPR011705. BACK.
IPR000210. BTB/POZ_dom.
IPR000421. FA58C.
IPR008979. Galactose-bd-like.
IPR011333. SKP1/BTB/POZ.
[Graphical view]
PfamiPF07707. BACK. 1 hit.
PF00651. BTB. 1 hit.
PF00754. F5_F8_type_C. 2 hits.
[Graphical view]
SMARTiSM00875. BACK. 1 hit.
SM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF54695. SSF54695. 1 hit.
PROSITEiPS50097. BTB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8C726-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNSHPLRPF TAVGEIDHVH ILSEHIGALL IGEEYGDVTF VVEKKHFPAH
60 70 80 90 100
RVILAARCQY FRALLYGGMR ESQPEAEIPL QDTTAEAFTM LLRYIYTGRA
110 120 130 140 150
TLTDEKEEVL LDFLSLAHKY GFPELEDSTS EYLCTILNIQ NVCMTFDVAS
160 170 180 190 200
LYSLPKLTCM CCMFMDRNAQ EVLASDGFLS LSKTALLNIV LRDSFAAPEK
210 220 230 240 250
DIFLALLNWC KHNAKENHAE IMQAVRLPLM SLTELLNVVR PSGLLSPDAI
260 270 280 290 300
LDAIKVRSES RDMDLNYRGM LIPEENIATM KYGAQVVKGE LKSALLDGDT
310 320 330 340 350
QNYDLDHGFS RHPIDDDCRS GIEIKLGQPS IINHIRLLLW DRDSRSYSYF
360 370 380 390 400
IEVSMDELDW IRVIDHSHYL CRSWQKLYFP ARVCRYIRIV GTHNTVNKIF
410 420 430 440 450
HIVAFECMFT NKAFTLEKGL IVPLENVATI ADCASVIEGV SRSRNALLNG
460 470 480 490 500
DTKNYDWDSG YTCHQLGSGA IVVQLAQPYI IGSIRLLLWD CDDRSYSYYV
510 520 530 540 550
EVSTNQQQWT MVADRTKVSC KSWQSVTFER QPASFIRIVG THNTANEVFH
560 570 580 590 600
CVHFECPEQQ SNQKEDSSEE PGTGDPSTPN QQLDPHAPRA PSASSLPPSP
610
GPNSRSPNQQ NQ
Length:612
Mass (Da):69,148
Last modified:March 1, 2003 - v1
Checksum:iD564B2DB24F0D9FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK052664 mRNA. Translation: BAC35088.1.
BC057897 mRNA. Translation: AAH57897.1.
CCDSiCCDS28599.1.
RefSeqiNP_081336.1. NM_027060.1.
NP_766206.1. NM_172618.2.
UniGeneiMm.41220.

Genome annotation databases

EnsembliENSMUST00000079924; ENSMUSP00000078845; ENSMUSG00000062202.
ENSMUST00000168787; ENSMUSP00000127300; ENSMUSG00000062202.
GeneIDi224671.
KEGGimmu:224671.
UCSCiuc008btt.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK052664 mRNA. Translation: BAC35088.1.
BC057897 mRNA. Translation: AAH57897.1.
CCDSiCCDS28599.1.
RefSeqiNP_081336.1. NM_027060.1.
NP_766206.1. NM_172618.2.
UniGeneiMm.41220.

3D structure databases

ProteinModelPortaliQ8C726.
SMRiQ8C726. Positions 22-250.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000078845.

PTM databases

iPTMnetiQ8C726.
PhosphoSiteiQ8C726.

Proteomic databases

EPDiQ8C726.
MaxQBiQ8C726.
PaxDbiQ8C726.
PRIDEiQ8C726.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000079924; ENSMUSP00000078845; ENSMUSG00000062202.
ENSMUST00000168787; ENSMUSP00000127300; ENSMUSG00000062202.
GeneIDi224671.
KEGGimmu:224671.
UCSCiuc008btt.2. mouse.

Organism-specific databases

CTDi114781.
MGIiMGI:1916625. Btbd9.

Phylogenomic databases

eggNOGiKOG4350. Eukaryota.
ENOG410Z7D9. LUCA.
GeneTreeiENSGT00550000074511.
HOGENOMiHOG000007577.
HOVERGENiHBG050744.
InParanoidiQ8C726.
KOiK10481.
OMAiIINHIRL.
OrthoDBiEOG71P29D.
PhylomeDBiQ8C726.
TreeFamiTF318638.

Miscellaneous databases

NextBioi377296.
PROiQ8C726.
SOURCEiSearch...

Gene expression databases

BgeeiQ8C726.
CleanExiMM_BTBD9.
GenevisibleiQ8C726. MM.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
InterProiIPR011705. BACK.
IPR000210. BTB/POZ_dom.
IPR000421. FA58C.
IPR008979. Galactose-bd-like.
IPR011333. SKP1/BTB/POZ.
[Graphical view]
PfamiPF07707. BACK. 1 hit.
PF00651. BTB. 1 hit.
PF00754. F5_F8_type_C. 2 hits.
[Graphical view]
SMARTiSM00875. BACK. 1 hit.
SM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF54695. SSF54695. 1 hit.
PROSITEiPS50097. BTB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Kidney.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Mammary gland.

Entry informationi

Entry nameiBTBD9_MOUSE
AccessioniPrimary (citable) accession number: Q8C726
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 29, 2003
Last sequence update: March 1, 2003
Last modified: March 16, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.