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Protein
Submitted name:

Putative uncharacterized protein

Gene

Tapbp

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:TapbpImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1201689. Tapbp.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei212 – 235HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiQ8C6N4.

Expressioni

Gene expression databases

BgeeiENSMUSG00000024308.
GenevisibleiQ8C6N4. MM.

Structurei

3D structure databases

ProteinModelPortaliQ8C6N4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini90 – 197Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST108

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG054633.
KOiK08058.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiView protein in InterPro
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR008056. Tapasin.
PfamiView protein in Pfam
PF07654. C1-set. 1 hit.
PRINTSiPR01669. TAPASIN.
SUPFAMiSSF48726. SSF48726. 1 hit.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q8C6N4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GLEWRRQHRG KGHLLLAATP GLAGRMPPAQ EKATAFAAWD DDEPWGPWTG
60 70 80 90 100
NGTFWLPAVK PSQEGVYLAT VHLPYLQGQV SLELTVHKAP RVSLTPAPVV
110 120 130 140 150
WAAPGEAPPE LLCLASHFFP AEGLEVKWEL RGGPGGSSRK VEGKTWLSTI
160 170 180 190 200
RHHSDGSVSQ SGHLQLPPVT AKQHGVHYVC RVYHSSLPAS GRSADVTLEV
210 220 230 240 250
AGFSGPSIED GIGLFLSAFL LLGLLKVLGW LAAYWTIPEV SKEKATAASL
260
TIPRNSKKSQ
Length:260
Mass (Da):27,963
Last modified:March 1, 2003 - v1
Checksum:i540E5791507726FB
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK054174 mRNA. Translation: BAC35681.1.
RefSeqiNP_001020484.1. NM_001025313.1.
NP_033344.1. NM_009318.2.
UniGeneiMm.154457.

Genome annotation databases

GeneIDi21356.
KEGGimmu:21356.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ8C6N4_MOUSE
AccessioniPrimary (citable) accession number: Q8C6N4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: June 7, 2017
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)