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Protein
Submitted name:

Putative uncharacterized protein

Gene

Ly9

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Ly9Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:96885. Ly9.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei344 – 36421HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ8C2D4.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000069319.

Structurei

3D structure databases

ProteinModelPortaliQ8C2D4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 12377Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini252 – 33079Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410JJ3F. Eukaryota.
ENOG410ZAYK. LUCA.
HOGENOMiHOG000013143.
HOVERGENiHBG030765.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF13895. Ig_2. 1 hit.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 3 hits.
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8C2D4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADLKRYWCD WALSPLSENP RMSQQQIFSP ILWIPLLFLL MEKLQKPQII
60 70 80 90 100
VESVTPSDTD SCTFTLICTV KGTKDSVQYS WTREDTHLNT YDGSHTLRVS
110 120 130 140 150
QSVCDPDLPY TCKAWNPVSQ NSSQPVRIWQ FCTGASRRKT AAGKTVVGIL
160 170 180 190 200
GEPVTLPLEF RATRATKNVV WVFNTSVISQ ERRGAATADS RRKPKGSEER
210 220 230 240 250
RVRTSDQDQS LKISQLKMED AGPYHAYVCS EASRDPSVRH FTLLVYKRLE
260 270 280 290 300
KPSVTNSPVH MMNGICKVVL TCSVDGGGNN VTYTWMPLQN KAVMSQGKSH
310 320 330 340 350
LNVSWESGEH LPNFTCTAHN PVSNSSSQFS SGTICSGPER NKRFWLLLLL
360 370 380 390 400
VLLLLMLIGG YFILRKKKQC SSLATRYRQA EVPAEIPETP TGHGQFSVLS
410 420 430 440 450
QRYEKLDMSA KTTRHQPTPT SDTSSESSAT TEEDDEKTRI HSTANSRNQV
460 470 480 490 500
YDLVTHQDIA HALAYEGQVE YEAITPYDKV DESMDEEDMA YIQVSLNVQG
510 520 530 540
ETPLPQKKED SNTIYCSVQK PKKTAQTPQQ DAESPETPTY ENFT
Length:544
Mass (Da):61,161
Last modified:March 1, 2003 - v1
Checksum:iA4EED977F3B25914
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK088815 mRNA. Translation: BAC40591.1.
UniGeneiMm.560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK088815 mRNA. Translation: BAC40591.1.
UniGeneiMm.560.

3D structure databases

ProteinModelPortaliQ8C2D4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000069319.

Proteomic databases

PaxDbiQ8C2D4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:96885. Ly9.

Phylogenomic databases

eggNOGiENOG410JJ3F. Eukaryota.
ENOG410ZAYK. LUCA.
HOGENOMiHOG000013143.
HOVERGENiHBG030765.

Miscellaneous databases

ChiTaRSiLy9. mouse.
SOURCEiSearch...

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF13895. Ig_2. 1 hit.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 3 hits.
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8C2D4_MOUSE
AccessioniPrimary (citable) accession number: Q8C2D4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 11, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.