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Protein

Galectin

Gene

Pick1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

LectinUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
GalectinUniRule annotation
Gene namesi
Name:Pick1Imported
Synonyms:PrkcabpImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:894645. Pick1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ8C1W2.
PRIDEiQ8C1W2.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000018295.

Structurei

3D structure databases

ProteinModelPortaliQ8C1W2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 10584PDZ (DHR)InterPro annotationAdd
BLAST
Domaini144 – 326183AHInterPro annotationAdd
BLAST
Domaini395 – 530136GalectinInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 PDZ (DHR) domain.UniRule annotation
Contains 1 galectin domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG3651. Eukaryota.
ENOG410YZG6. LUCA.

Family and domain databases

Gene3Di1.20.1270.60. 1 hit.
2.30.42.10. 1 hit.
2.60.120.200. 1 hit.
InterProiIPR027267. AH/BAR-dom.
IPR010504. AH_dom.
IPR030798. Arfaptin_fam.
IPR013320. ConA-like_dom.
IPR001079. Galectin_CRD.
IPR001478. PDZ.
[Graphical view]
PANTHERiPTHR12141. PTHR12141. 1 hit.
PfamiPF06456. Arfaptin. 1 hit.
PF00337. Gal-bind_lectin. 1 hit.
PF00595. PDZ. 1 hit.
[Graphical view]
SMARTiSM01015. Arfaptin. 1 hit.
SM00908. Gal-bind_lectin. 1 hit.
SM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50156. SSF50156. 1 hit.
PROSITEiPS50870. AH. 1 hit.
PS51304. GALECTIN. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8C1W2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFADLDYDIE EDKLGIPTVP GKVTLQKDAQ NLIGISIGGG AQYCPCLYIV
60 70 80 90 100
QVFDNTPAAL DGTVAAGDEI TGVNGKSIKG KTKVEVAKMI QEVKGEVTIH
110 120 130 140 150
YNKLQADPKQ GMSLDIVLKK VKHRLVENMS SGTADALGLS RAILCNDGLV
160 170 180 190 200
KRLEELERTA ELYKGMTEHT KNLLRAFYEL SQTHRAFGDV FSVIGVREPQ
210 220 230 240 250
PAASEAFVKF ADAHRSIEKF GIRLLKTIKP MLTDLNTYLN KAIPDTRLTI
260 270 280 290 300
KKYLDVKFEY LSYCLKVKEM DDEEYSCIAL GEPLYRVSTG NYEYRLILRC
310 320 330 340 350
RQEARARFSQ MRKDVLEKME LLDQKHGLRQ CQPGHESLPM CTHGLRPTPA
360 370 380 390 400
LTAGTWRGSV ADSDTVVKLD DGHLNNSLGS PVQADVYFPR MIVPFCGHIK
410 420 430 440 450
GDRRPDKKAL VMGILDLTPE SFAVGLTSGD PEDPPAHVAI ELEAVFTDLQ
460 470 480 490 500
LLRNSCISGE RGGRAVSSRA VPYFSFIPDQ PFRAEILCQH PQFRVFVDGH
510 520 530
QLFDFYHCIQ TVSATDTIKI NGDLQITKLG
Length:530
Mass (Da):58,972
Last modified:March 1, 2003 - v1
Checksum:i779B4AEE1C83BF0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK090155 mRNA. Translation: BAC41117.1.
RefSeqiNP_001039023.1. NM_001045558.1.
NP_032863.2. NM_008837.3.
UniGeneiMm.259464.

Genome annotation databases

GeneIDi18693.
KEGGimmu:18693.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK090155 mRNA. Translation: BAC41117.1.
RefSeqiNP_001039023.1. NM_001045558.1.
NP_032863.2. NM_008837.3.
UniGeneiMm.259464.

3D structure databases

ProteinModelPortaliQ8C1W2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000018295.

Proteomic databases

PaxDbiQ8C1W2.
PRIDEiQ8C1W2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18693.
KEGGimmu:18693.

Organism-specific databases

CTDi9463.
MGIiMGI:894645. Pick1.

Phylogenomic databases

eggNOGiKOG3651. Eukaryota.
ENOG410YZG6. LUCA.

Miscellaneous databases

ChiTaRSiPick1. mouse.
SOURCEiSearch...

Family and domain databases

Gene3Di1.20.1270.60. 1 hit.
2.30.42.10. 1 hit.
2.60.120.200. 1 hit.
InterProiIPR027267. AH/BAR-dom.
IPR010504. AH_dom.
IPR030798. Arfaptin_fam.
IPR013320. ConA-like_dom.
IPR001079. Galectin_CRD.
IPR001478. PDZ.
[Graphical view]
PANTHERiPTHR12141. PTHR12141. 1 hit.
PfamiPF06456. Arfaptin. 1 hit.
PF00337. Gal-bind_lectin. 1 hit.
PF00595. PDZ. 1 hit.
[Graphical view]
SMARTiSM01015. Arfaptin. 1 hit.
SM00908. Gal-bind_lectin. 1 hit.
SM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50156. SSF50156. 1 hit.
PROSITEiPS50870. AH. 1 hit.
PS51304. GALECTIN. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8C1W2_MOUSE
AccessioniPrimary (citable) accession number: Q8C1W2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 11, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.