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Protein
Submitted name:

Putative uncharacterized protein

Gene

Setd8

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Setd8Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1915206. Setd8.

PTM / Processingi

Proteomic databases

PaxDbiQ8C1L9.
PRIDEiQ8C1L9.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000052953.

Structurei

3D structure databases

ProteinModelPortaliQ8C1L9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1085. Eukaryota.
COG2940. LUCA.
HOGENOMiHOG000020818.

Family and domain databases

InterProiIPR016858. Hist_H4-K20_MeTrfase.
[Graphical view]
PROSITEiPS51571. SAM_MT43_PR_SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8C1L9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GGARGRRPAT GHGRTGAVGR AGPFPERRGG AGGVGSSSSS GGGSAVWPGR
60 70 80 90 100
GEGEGAGRAA MGLAGLQENV FAGQSKIYAY MSPNKCSAMR SPLQEENSVA
110 120 130 140 150
HHEVKCPGKP LAGIYRKREE KRNTGNVIRS AVKSDEQKSK DTRRGPLAPF
160 170 180 190 200
PNQKSEAAEP PKTPPPSCDS TNVAVAKQAL KKSLKGKQAP RKKSQGKTQQ
210 220 230 240 250
NRKLTDFYPV RRSSRKSKAE LQSEERKKID ELIESGKEEG MKIDLIDGKG
260 270 280 290 300
RGVIATKQFS RGDFVVEYHG DLIEITDAKK REALYAQDPS TGCYMYYFQY
310 320
LSKTLLRGCH SRNEPPRETH QSQ
Length:323
Mass (Da):35,073
Last modified:March 1, 2003 - v1
Checksum:iD9350AE52F04046B
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK010593 mRNA. Translation: BAC25304.1.
RefSeqiNP_001297652.1. NM_001310723.1.
UniGeneiMm.137966.
Mm.472072.

Genome annotation databases

GeneIDi67956.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK010593 mRNA. Translation: BAC25304.1.
RefSeqiNP_001297652.1. NM_001310723.1.
UniGeneiMm.137966.
Mm.472072.

3D structure databases

ProteinModelPortaliQ8C1L9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000052953.

Proteomic databases

PaxDbiQ8C1L9.
PRIDEiQ8C1L9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi67956.

Organism-specific databases

CTDi67956.
MGIiMGI:1915206. Setd8.

Phylogenomic databases

eggNOGiKOG1085. Eukaryota.
COG2940. LUCA.
HOGENOMiHOG000020818.

Miscellaneous databases

ChiTaRSiSetd8. mouse.
SOURCEiSearch...

Family and domain databases

InterProiIPR016858. Hist_H4-K20_MeTrfase.
[Graphical view]
PROSITEiPS51571. SAM_MT43_PR_SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ8C1L9_MOUSE
AccessioniPrimary (citable) accession number: Q8C1L9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 6, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.