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Protein
Submitted name:

Putative uncharacterized protein

Gene

Lrfn3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Lrfn3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2442512. Lrfn3.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei93 – 11422HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ8C1E8.

Expressioni

Gene expression databases

BgeeiENSMUSG00000036957.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000037616.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0619. Eukaryota.
COG4886. LUCA.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q8C1E8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DQRPVPGIRM YQIQYNSSAD DILVYRMIPA DSRSFLLTDL ASGRTYDLCV
60 70 80 90 100
LAVYEDSATG LTATRPVGCA RFSTEPALRP CAAPHAPFLG GTMIIALGGV
110 120 130 140 150
IVASVLVFIF VLLLRYKVHG GQPPGKAKAT APVSSVCSQT NGALGPVPSA
160 170 180
PAPEPAAPRA HTVVQLDCEP WGPSHEPAGP
Length:180
Mass (Da):18,862
Last modified:March 1, 2003 - v1
Checksum:iDCD4215FAA70BCF5
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK028115 mRNA. Translation: BAC25755.1.
UniGeneiMm.23157.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK028115 mRNA. Translation: BAC25755.1.
UniGeneiMm.23157.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000037616.

Proteomic databases

PaxDbiQ8C1E8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:2442512. Lrfn3.

Phylogenomic databases

eggNOGiKOG0619. Eukaryota.
COG4886. LUCA.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000036957.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8C1E8_MOUSE
AccessioniPrimary (citable) accession number: Q8C1E8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.