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Q8C0B4 (Q8C0B4_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Bcas1 MGI 1924210
OrganismMus musculus (Mouse) EMBL BAC27568.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length379 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAC27568.1

Sequences

Sequence LengthMass (Da)Tools
Q8C0B4 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: D4A4390E8CEDBD32

FASTA37940,542
        10         20         30         40         50         60 
EQTLPATGPL APSPPESQAE APAQDKDFGF LNRFFKLDKG RESAPVNSQP KEAKGSEDPE 

        70         80         90        100        110        120 
QATEAPAVPG NPHGVSAGED IVDSEQRGQD VDTLSYSVPG DPEVPGTTKE DPQVVDTTEN 

       130        140        150        160        170        180 
SSSIMSFFKT LVSPNKTETK KDPEDTKATK ADSVCDGHAA GQKMSETQAK SKKKRLDSPR 

       190        200        210        220        230        240 
VGLSFRKLFR HKDTENSPTT SANLKSDKAN FTPQETRGKT KATKSCSPPP PPPEPTSEGR 

       250        260        270        280        290        300 
DSGKEKAGPT SLPLGKLFWK KTSNSVEKTP SPPEPEPAGT AQKNKETSSS KDKKSVDKKS 

       310        320        330        340        350        360 
ATENSKQKNG KQEVREPAPC VQPPTVEANA MQTGDKTPKK SEKRRQSLGG FLKGLGPKRM 

       370 
SDAQVQTDPV SIGPVGKSK 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
[5]Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K. expand/collapse author list , Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
[6]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC27568.1.
Tissue: Medulla oblongata EMBL BAC27568.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK031825 mRNA. Translation: BAC27568.1.
UniGeneMm.240850.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ8C0B4. 1 interaction.

Proteomic databases

PRIDEQ8C0B4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1924210. Bcas1.

Phylogenomic databases

HOVERGENHBG082347.

Gene expression databases

GenevestigatorQ8C0B4.

Family and domain databases

InterProIPR026115. NABC1.
[Graphical view]
PANTHERPTHR15016. PTHR15016. 1 hit.
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ8C0B4_MOUSE
AccessionPrimary (citable) accession number: Q8C0B4
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 22, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)