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Unreviewed, UniProtKB/TrEMBL Q8C071 (Q8C071_MOUSE)

Last modified January 19, 2010. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein EMBL BAC27700.1
Gene names
Name: Cpt1c MGI 2446526
OrganismMus musculus (Mouse) EMBL BAC27700.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

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Protein attributes

Sequence length687 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Belongs to the carnitine/choline acetyltransferase family.

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Ontologies

Keywords
   Molecular functionAcyltransferase RuleBase RU003801V0
Transferase
Gene Ontology (GO)
   Cellular componentmitochondrion

Inferred from direct assay. Source: MGI

   Molecular functionacyltransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue6871 EMBL BAC27700.1

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Sequences

Sequence LengthMass (Da)Tools
Q8C071-1 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 4878C8B0C28937EB

FASTA68777,611
        10         20         30         40         50         60 
MAEAHQASSL LSSLSSDGAE VELSSPVWQE IYLCALRSWK RHLWRVWNDF LAGVVPATPL 

        70         80         90        100        110        120 
SWLFLFSTIQ LACLLQLDPS LGLMEKIKEL LPDWGGQHHQ LQGFLSAAVF ASCLWGALIF 

       130        140        150        160        170        180 
TLHVALRLLL SHHGWLLEPH GAMSSPTKTW LALVRIFSGR HPRLFSFQRA LPRQPVPSAQ 

       190        200        210        220        230        240 
ETVRKYLESV RPVLGDDAFD RATALANDFL RLHAPRLQLY LQLKSWCTSN YVSDWWEEFV 

       250        260        270        280        290        300 
YLRSRGSLIN STYYMMDFLY VTPTPLQAAR AGNAVHTLLL YRHLLNRQEI SPTLLMGMRP 

       310        320        330        340        350        360 
LCSAQYERMF NTTRIPGVEK DHLRHLQDSR HVAVFHRGRF FRVGTHSPNG LLSPRALEQQ 

       370        380        390        400        410        420 
FQDILDDPSP ACPLEEHLAA LTAAPRSMWA QVRESVKTHA ATALEAVEGA AFFVSLDSEP 

       430        440        450        460        470        480 
AGLTREDPAA SLDAYAHALL AGRGHDRWFD KSFTLIVFSN GKLGLSVEHS WADCPVSGHL 

       490        500        510        520        530        540 
WEFTLATECF QLGYATDGHC KGHPDPTLPQ PQRLQWDLPE QIQPSISLAL RGAKTLSGNI 

       550        560        570        580        590        600 
DCHVFPFSHF GKSFIKCCHV SSDSFIQLVL QLAHFRDRGQ FCLTYESAMT RLFLEGRTET 

       610        620        630        640        650        660 
VRSCTREACQ FVRAMDNKET DQHCLALFRV AVDKHQALLK AAMSGQGIDR HLFALYIMSR 

       670        680 
LLHMQSPFLT QVQSQQWLLS TSQVPVQ

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References

[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J EMBL BAC27700.1.
Tissue: Medulla oblongata EMBL BAC27700.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK032101 mRNA. Translation: BAC27700.1.
IPIIPI00221577.
UniGeneMm.231465

3D structure databases

HSSPHSSP built from PDB template 1NM8 based on UniProtKB P43155.
SMRQ8C071. Positions 167-686.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8C071.

Genome annotation databases

EnsemblENSMUST00000063761; ENSMUSP00000069539; ENSMUSG00000007783; Mus musculus. [Genome view]

Organism-specific databases

MGIMGI:2446526. Cpt1c.

Phylogenomic databases

HOVERGENQ8C071.
InParanoidQ8C071.

Gene expression databases

ArrayExpressQ8C071.
BgeeQ8C071.
GenevestigatorQ8C071.

Family and domain databases

InterProIPR000542. Carn_acyl_trans.
[Graphical view]
PANTHERPTHR22589. Carn_acyl_trans. 1 hit.
PfamPF00755. Carn_acyltransf. 1 hit.
[Graphical view]
PROSITEPS00439. ACYLTRANSF_C_1. 1 hit.
PS00440. ACYLTRANSF_C_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

SOURCESearch...

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Entry information

Entry nameQ8C071_MOUSE
AccessionPrimary (citable) accession number: Q8C071
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 19, 2010
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information