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Q8BZM2 (Q8BZM2_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified October 19, 2011. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL BAC28610.1
Gene names
Name:Anks1b MGI 1924781
OrganismMus musculus (Mouse) EMBL BAC28610.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length464 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAC28610.1

Sequences

Sequence LengthMass (Da)Tools
Q8BZM2 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: EF3AF79C50E3FF73

FASTA46452,315
        10         20         30         40         50         60 
LKRFPVHPVT GPRCPVQTGG QWLESIGLPQ YENHLMANGF DSVQFMGSNV VEDQDLLEIG 

        70         80         90        100        110        120 
ILNSGHRQRI LQAIQLLPKM RPIGHDGYHP TSVAEWLDSI ELGDYTKAFL INGYTSMDLL 

       130        140        150        160        170        180 
KKIWELELIN VLKISLIGHR KRILASLGDR LHDDPPQKPP RSITLREPSG NHTPPQLSPS 

       190        200        210        220        230        240 
LSQSTYTTGG SLDVPHIIMQ GDARRRRNEN YFDDIPRSKL ERQMAQTGDW GEPSITLRPP 

       250        260        270        280        290        300 
NEATASTPVQ YWQHHPEKLI FQSCDYKAFY LGSMLIKELR GTESTQDACA KMRANCQKST 

       310        320        330        340        350        360 
EQMKKVPTII LSVSYKGVKF IDAANKNIIA EHEIRNISCA AQDPEDLSTF AYITKDLKSN 

       370        380        390        400        410        420 
HHYCHVFTAF DVNLAYEIIL TLGQAFEVAY QLALQARKGG HSSTLPESFE NKPSKPIPKP 

       430        440        450        460 
RVSIRKSVQI DPSEQKTLAN LPWIVEPGQE AKRGINTKYE TTIF

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed: 10349636] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.
[2]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed: 16141073] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.
[3]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.
[4]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.
[5]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.
[6]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed: 11042159] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.
[7]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed: 11076861] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.
[8]Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K. expand/collapse author list , Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC28610.1.
Tissue: Diencephalon EMBL BAC28610.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK034154 mRNA. Translation: BAC28610.1.
IPIIPI00664176.
UniGeneMm.440605.

3D structure databases

HSSPHSSP built from PDB template 1AQC based on UniProtKB Q02410.
ProteinModelPortalQ8BZM2.
ModBaseSearch...

Protein-protein interaction databases

IntActQ8BZM2. 1 interaction.
STRINGQ8BZM2.

Proteomic databases

PRIDEQ8BZM2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGroNOG07913.
GeneTreeENSGT00530000063104.
HOVERGENHBG057268.
InParanoidQ8BZM2.

Gene expression databases

ArrayExpressQ8BZM2.
GenevestigatorQ8BZM2.

Family and domain databases

InterProIPR011993. PH_type.
IPR006020. PTyr_interaction_dom.
IPR001660. SAM.
IPR013761. SAM/pointed.
IPR021129. SAM_type1.
[Graphical view]
Gene3DG3DSA:2.30.29.30. PH_type. 1 hit.
G3DSA:1.10.150.50. SAM_type. 2 hits.
PfamPF00640. PID. 1 hit.
PF00536. SAM_1. 2 hits.
[Graphical view]
SMARTSM00462. PTB. 1 hit.
SM00454. SAM. 2 hits.
[Graphical view]
SUPFAMSSF47769. SAM_homology. 2 hits.
PROSITEPS01179. PID. 1 hit.
PS50105. SAM_DOMAIN. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8BZM2_MOUSE
AccessionPrimary (citable) accession number: Q8BZM2
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: October 19, 2011
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Sequence annotation·Sequences·References·Cross-refs·Entry info