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Protein

LIM domain only protein 3

Gene

Lmo3

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
LIM domain only protein 3
Short name:
LMO-3
Alternative name(s):
Neuronal-specific transcription factor DAT1
Gene namesi
Name:Lmo3
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:102810 Lmo3

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000758181 – 145LIM domain only protein 3Add BLAST145

Proteomic databases

MaxQBiQ8BZL8
PaxDbiQ8BZL8
PRIDEiQ8BZL8

PTM databases

PhosphoSitePlusiQ8BZL8

Expressioni

Gene expression databases

BgeeiENSMUSG00000030226
CleanExiMM_LMO3
ExpressionAtlasiQ8BZL8 baseline and differential
GenevisibleiQ8BZL8 MM

Interactioni

Protein-protein interaction databases

BioGridi224886, 6 interactors
IntActiQ8BZL8, 1 interactor
STRINGi10090.ENSMUSP00000124862

Structurei

3D structure databases

ProteinModelPortaliQ8BZL8
SMRiQ8BZL8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 73LIM zinc-binding 1PROSITE-ProRule annotationAdd BLAST63
Domaini75 – 137LIM zinc-binding 2PROSITE-ProRule annotationAdd BLAST63

Keywords - Domaini

LIM domain, Repeat

Phylogenomic databases

eggNOGiKOG0490 Eukaryota
ENOG410YIJ3 LUCA
GeneTreeiENSGT00760000118921
HOVERGENiHBG054231
InParanoidiQ8BZL8
PhylomeDBiQ8BZL8
TreeFamiTF351071

Family and domain databases

InterProiView protein in InterPro
IPR001781 Znf_LIM
PfamiView protein in Pfam
PF00412 LIM, 2 hits
SMARTiView protein in SMART
SM00132 LIM, 2 hits
PROSITEiView protein in PROSITE
PS00478 LIM_DOMAIN_1, 2 hits
PS50023 LIM_DOMAIN_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q8BZL8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSVQPDTKP KGCAGCNRKI KDRYLLKALD KYWHEDCLKC ACCDCRLGEV
60 70 80 90 100
GSTLYTKANL ILCRRDYLRL FGVTGNCAAC SKLIPAFEMV MRAKDNVYHL
110 120 130 140
DCFACQLCNQ RFCVGDKFFL KNNMILCQTD YEEGLMKEGY APQVR
Length:145
Mass (Da):16,594
Last modified:March 1, 2003 - v1
Checksum:i05284546BA5EC226
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034177 mRNA Translation: BAC28617.1
BC057086 mRNA Translation: AAH57086.1
CCDSiCCDS20669.1
RefSeqiNP_997105.1, NM_207222.2
XP_006505403.1, XM_006505340.1
XP_006505404.1, XM_006505341.3
XP_006505405.1, XM_006505342.2
XP_006505407.1, XM_006505344.3
XP_011239433.1, XM_011241131.2
XP_011239434.1, XM_011241132.2
XP_011239435.1, XM_011241133.2
XP_017176802.1, XM_017321313.1
UniGeneiMm.490545

Genome annotation databases

EnsembliENSMUST00000161450; ENSMUSP00000124862; ENSMUSG00000030226
ENSMUST00000162772; ENSMUSP00000125335; ENSMUSG00000030226
ENSMUST00000163024; ENSMUSP00000125589; ENSMUSG00000030226
ENSMUST00000203435; ENSMUSP00000145048; ENSMUSG00000030226
GeneIDi109593
KEGGimmu:109593
UCSCiuc009enl.1 mouse

Similar proteinsi

Entry informationi

Entry nameiLMO3_MOUSE
AccessioniPrimary (citable) accession number: Q8BZL8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: March 1, 2003
Last modified: March 28, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

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