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Q8BZD0

- Q8BZD0_MOUSE

UniProt

Q8BZD0 - Q8BZD0_MOUSE

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Protein
Submitted name: Putative uncharacterized protein
Gene
Dbx2
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding transcription factor activity Source: InterPro
  2. transcription regulatory region sequence-specific DNA binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Dbx2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:107445. Dbx2.

Subcellular locationi

Nucleus By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotations

PTM / Processingi

Proteomic databases

PaxDbiQ8BZD0.

Expressioni

Gene expression databases

BgeeiQ8BZD0.
GenevestigatoriQ8BZD0.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000060424.

Structurei

3D structure databases

ProteinModelPortaliQ8BZD0.

Family & Domainsi

Sequence similaritiesi

Contains homeobox DNA-binding domain.SAAS annotations

Keywords - Domaini

HomeoboxUniRule annotationSAAS annotations

Phylogenomic databases

eggNOGiNOG270330.
HOGENOMiHOG000112172.
HOVERGENiHBG104467.
InParanoidiQ8BZD0.
PhylomeDBiQ8BZD0.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
PR00031. HTHREPRESSR.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8BZD0-1 [UniParc]FASTAAdd to Basket

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LPASPVPLKL CPAGPFGVRW AFQMPPGRAP GERDSAFQPS APVPSKPFLL    50
SAPPFYSACC GGSCRRPASP TAFSREEHGL PLLTQDSNSK ARRGILRRAV 100
FSEEQRKALE KMFQKQKYIS KTDRRKLAVS LGLKESQVKI WFQNRRMKWR 150
NSKEKEVLSS RCLQEVSLQE DRLARPAVGC PPQCPSIWEV SQPHSSPSWR 200
EETPESAERL TQENSGVLEA DSLRGTLYLC PEKGPRDKHG LQSTI 245
Length:245
Mass (Da):27,438
Last modified:March 1, 2003 - v1
Checksum:i7B212B2FA7BBE0FC
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK035803 mRNA. Translation: BAC29191.1.
RefSeqiNP_997416.2. NM_207533.2.
UniGeneiMm.152937.

Genome annotation databases

GeneIDi223843.
KEGGimmu:223843.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK035803 mRNA. Translation: BAC29191.1 .
RefSeqi NP_997416.2. NM_207533.2.
UniGenei Mm.152937.

3D structure databases

ProteinModelPortali Q8BZD0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000060424.

Proteomic databases

PaxDbi Q8BZD0.

Protocols and materials databases

DNASUi 223843.
Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 223843.
KEGGi mmu:223843.

Organism-specific databases

CTDi 440097.
MGIi MGI:107445. Dbx2.

Phylogenomic databases

eggNOGi NOG270330.
HOGENOMi HOG000112172.
HOVERGENi HBG104467.
InParanoidi Q8BZD0.
PhylomeDBi Q8BZD0.

Miscellaneous databases

NextBioi 376933.
SOURCEi Search...

Gene expression databases

Bgeei Q8BZD0.
Genevestigatori Q8BZD0.

Family and domain databases

Gene3Di 1.10.10.60. 1 hit.
InterProi IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
[Graphical view ]
Pfami PF00046. Homeobox. 1 hit.
[Graphical view ]
PRINTSi PR00024. HOMEOBOX.
PR00031. HTHREPRESSR.
SMARTi SM00389. HOX. 1 hit.
[Graphical view ]
SUPFAMi SSF46689. SSF46689. 1 hit.
PROSITEi PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.

Entry informationi

Entry nameiQ8BZD0_MOUSE
AccessioniPrimary (citable) accession number: Q8BZD0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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