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Protein
Submitted name:

Putative uncharacterized protein

Gene

Tnrc6b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Tnrc6bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2443730. Tnrc6b.

PTM / Processingi

Proteomic databases

PaxDbiQ8BWL0.
PRIDEiQ8BWL0.

Expressioni

Gene expression databases

BgeeiENSMUSG00000047888.
GenevisibleiQ8BWL0. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000064336.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 9794Ago_hookInterPro annotationAdd
BLAST
Domaini345 – 624280TNRC6-PABC_bdgInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili282 – 30928Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IET2. Eukaryota.
ENOG410YDKH. LUCA.
HOVERGENiHBG062594.
KOiK18412.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR019486. Argonaute_hook_dom.
IPR012677. Nucleotide-bd_a/b_plait.
IPR032226. TNRC6_PABC-bd.
IPR033500. TNRC6B.
[Graphical view]
PANTHERiPTHR13020:SF32. PTHR13020:SF32. 1 hit.
PfamiPF10427. Ago_hook. 1 hit.
PF16608. TNRC6-PABC_bdg. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8BWL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDAGASTTG WGNTPANAPN AMKPNSKSMQ DGWGESDGPV TGARHPSWEE
60 70 80 90 100
EDDGGVWNTA GSQGSTSSHN SASWGQGGKK QMKCSLKGGN NDSWMNPLAK
110 120 130 140 150
QFSNMGLLSQ TEDNPSSKMD LSVDKKFDVD KRTMNLGDFN DIMRKDRPGF
160 170 180 190 200
RPPNSKDLGT TDSGPYFEKG GSHGLFGNST AQSRGLHTPV QPLSSSPGLR
210 220 230 240 250
AQVPPQFISP QVSASMLKQF PNSGLNPGLF NVGPQLSPQQ IAMLSQLPQI
260 270 280 290 300
PQFQLACQLL LQQQQQQQQL LQNQRKISQA VRQQQEQQLA RMVSALQQQQ
310 320 330 340 350
QQQQQQQRQP SMKHSPSHPV GPKPHLDNMV PNALNVGLPD LPTKGPIPGY
360 370 380 390 400
GSGFSSGGMD YGMVGGKEAG TESRFKQWTS MMEGLPSVAT QEATMHKNGA
410 420 430 440 450
IVAPGKTRGG SPYNQFDIIP GDTLGGHTGP AGDSWLPAKS PPTNKIGSKS
460 470 480 490 500
SNASWPPEFQ PGVPWKGIQN IDPESDPYVT PGSVLGGTTT SPIVDTDHQL
510 520 530 540 550
LRDNTTGSNS SLNTSLPSPG AWPYSASDNS FTNVHSTSAK FPDYKSTWSP
560 570 580 590 600
DPIGHNPTHL SNKMWKNHIS SRNTTPLTRP PPGLTNPKPA SPWSSTAPRS
610 620 630 640 650
VRGWGTQDSR IASASTWSDG GSVRPSYWLV LHNLTPQIDG STLRTICMQH
660 670 680 690 700
GPLLTFHLNL TQGTALIRYS TKQEAAKAQT ALHMCVLGNT TILAEFATED
710 720 730 740 750
EVSRFLAQAQ PPTPAATPSA PATGWQSLET SQNQADPVGP ALNLFGGSTG
760 770 780 790 800
LGQWSSSAGG SSGADLAGTS LWGPPNYSSS LWGVPTVEDP HRMGSPAPLL
810
PGDLLGGGSD SI
Length:812
Mass (Da):86,396
Last modified:March 1, 2003 - v1
Checksum:i17237962B71CDF60
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK052247 mRNA. Translation: BAC34897.1.
RefSeqiNP_659061.2. NM_144812.2.
UniGeneiMm.131328.
Mm.412092.

Genome annotation databases

GeneIDi213988.
KEGGimmu:213988.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK052247 mRNA. Translation: BAC34897.1.
RefSeqiNP_659061.2. NM_144812.2.
UniGeneiMm.131328.
Mm.412092.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000064336.

Proteomic databases

PaxDbiQ8BWL0.
PRIDEiQ8BWL0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi213988.
KEGGimmu:213988.

Organism-specific databases

CTDi23112.
MGIiMGI:2443730. Tnrc6b.

Phylogenomic databases

eggNOGiENOG410IET2. Eukaryota.
ENOG410YDKH. LUCA.
HOVERGENiHBG062594.
KOiK18412.

Miscellaneous databases

ChiTaRSiTnrc6b. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000047888.
GenevisibleiQ8BWL0. MM.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR019486. Argonaute_hook_dom.
IPR012677. Nucleotide-bd_a/b_plait.
IPR032226. TNRC6_PABC-bd.
IPR033500. TNRC6B.
[Graphical view]
PANTHERiPTHR13020:SF32. PTHR13020:SF32. 1 hit.
PfamiPF10427. Ago_hook. 1 hit.
PF16608. TNRC6-PABC_bdg. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8BWL0_MOUSE
AccessioniPrimary (citable) accession number: Q8BWL0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: September 7, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.