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Protein
Submitted name:

Putative uncharacterized protein

Gene

Pgr

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorUniRule annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:PgrImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:97567. Pgr.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiQ8BW69.

Expressioni

Gene expression databases

BgeeiQ8BW69.
GenevisibleiQ8BW69. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000063562.

Structurei

3D structure databases

ProteinModelPortaliQ8BW69.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini329 – 40476Nuclear receptor DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotationSAAS annotation
Contains nuclear receptor DNA-binding domain.SAAS annotation

Keywords - Domaini

Zinc-fingerUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3575. Eukaryota.
ENOG410XRZC. LUCA.
HOVERGENiHBG007583.
KOiK08556.

Family and domain databases

Gene3Di1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProiIPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001723. Nuclear_hrmn_rcpt.
IPR000128. Progest_rcpt.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamiPF00104. Hormone_recep. 1 hit.
PF02161. Prog_receptor. 1 hit.
PF00105. zf-C4. 1 hit.
[Graphical view]
PRINTSiPR00544. PROGESTRONER.
PR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTiSM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
[Graphical view]
SUPFAMiSSF48508. SSF48508. 2 hits.
PROSITEiPS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8BW69-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ETEGSAAPLL KSKPRALEGT GSGGGVAANA ASAAPGGVTL VPKEDSRFSA
60 70 80 90 100
PRVSLEQDSP IAPGRSPLAT TVVDFIHVPI LPLNHALLAA RTRQLLEGDS
110 120 130 140 150
YDGGATAQGP FAPPRGSPSA PSPPVPCGDF PDCTYPLEGD PKEDVFPLYG
160 170 180 190 200
DFQTPGLKIK EEEEGADAAV RSPRPYLSAG ASSSTFPDFP LAPAPQRAPS
210 220 230 240 250
SRPGEAAVAG GPSSAAVSPA SSSGSALECI LYKAEGAPPT QGSFAPLPCK
260 270 280 290 300
PPAAGSCLLP RDSLPAAPAT AAAPAIYQPL GLNGLPQLGY QAAVLKDSLP
310 320 330 340 350
QVYPPYLNYL RPDSEASQSP QYGFDSLPQK ICLICGDEAS GCHYGVLTCG
360 370 380 390 400
SCKVFFKRAM EGQHNYLCAG RNDCIVDKIR RKNCPACRLR KCCQAGMVLG
410 420 430 440 450
GRKFKKFNKV RVMRTLDGVA LPQSVGLPNE SQALGQRITF SPNQEIQLVP
460 470 480 490 500
PLINLLMSIE PDVVYAGHDN TKPDTSSSLL TSLNQLGERQ LLSVVKWSKS
510 520 530 540 550
LPGFRNLHID DQITLIQYSW MSLMVFGLGW RSYKHVSGQM LYFAPDLILN
560 570 580 590 600
EQRMKELSFY SLCLTMWQIP QEFVKLQVTH EEFLCMKVLL LLNTIPLEGL
610 620 630 640 650
RSQSQFEEMR SSYIRELIKA IGLRQKGVVP SSQRFYQLTK LLDSLHDLVK
660 670 680 690
QLHLYCLNTF IQSRTLAVEF PEMMSEVIAA QLPKILAGMV KPLLFHKK
Length:698
Mass (Da):75,476
Last modified:March 1, 2003 - v1
Checksum:iE9009635FCC521EC
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK054117 mRNA. Translation: BAC35662.1.
RefSeqiNP_032855.2. NM_008829.2.
UniGeneiMm.12798.
Mm.437703.

Genome annotation databases

GeneIDi18667.
KEGGimmu:18667.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK054117 mRNA. Translation: BAC35662.1.
RefSeqiNP_032855.2. NM_008829.2.
UniGeneiMm.12798.
Mm.437703.

3D structure databases

ProteinModelPortaliQ8BW69.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000063562.

Proteomic databases

PaxDbiQ8BW69.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18667.
KEGGimmu:18667.

Organism-specific databases

CTDi5241.
MGIiMGI:97567. Pgr.

Phylogenomic databases

eggNOGiKOG3575. Eukaryota.
ENOG410XRZC. LUCA.
HOVERGENiHBG007583.
KOiK08556.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiQ8BW69.
GenevisibleiQ8BW69. MM.

Family and domain databases

Gene3Di1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProiIPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001723. Nuclear_hrmn_rcpt.
IPR000128. Progest_rcpt.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamiPF00104. Hormone_recep. 1 hit.
PF02161. Prog_receptor. 1 hit.
PF00105. zf-C4. 1 hit.
[Graphical view]
PRINTSiPR00544. PROGESTRONER.
PR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTiSM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
[Graphical view]
SUPFAMiSSF48508. SSF48508. 2 hits.
PROSITEiPS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: OviductImported.

Entry informationi

Entry nameiQ8BW69_MOUSE
AccessioniPrimary (citable) accession number: Q8BW69
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 6, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.