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Q8BVD7 (C1QT7_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified September 21, 2011. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Complement C1q tumor necrosis factor-related protein 7
Gene names
Name:C1qtnf7
Synonyms:Ctrp7
OrganismMus musculus (Mouse)
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length289 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Secreted Potential.

Sequence similarities

Contains 1 C1q domain.

Contains 1 collagen-like domain.

Ontologies

Keywords
   Cellular componentSecreted
   DomainCollagen
Signal
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processprotein homooligomerization

Inferred from direct assay. Source: MGI

   Cellular componentcollagen

Inferred from electronic annotation. Source: UniProtKB-KW

extracellular space

Inferred from direct assay. Source: MGI

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1616 Potential
Chain17 – 289273Complement C1q tumor necrosis factor-related protein 7
PRO_0000003540

Regions

Domain38 – 139102Collagen-like
Domain143 – 279137C1q

Experimental info

Sequence conflict201A → P in BAC37409. Ref.1
Sequence conflict1931Y → C in BAC37409. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q8BVD7 [UniParc].

Last modified April 26, 2005. Version 2.
Checksum: 45ED4E3C88E92CCB

FASTA28930,517
        10         20         30         40         50         60 
MIVLLYVTSL AICASGQPRA NQAKGESYSP RYICSIPGLP GPPGPPGANG SPGPHGRIGL 

        70         80         90        100        110        120 
PGRDGRDGRK GEKGEKGTAG LKGKTGPLGL AGEKGDQGET GKKGPIGPEG EKGEVGPAGP 

       130        140        150        160        170        180 
PGPKGDRGDQ GDPGLPGVCR CGSIVLKSAF SVGITTSYPE ERLPIIFNKV LFNEGEHYNP 

       190        200        210        220        230        240 
ATGKFICAFP GIYYFSYDIT LANKHLAIGL VHNGQYRIRT FDANTGNHDV ASGSTVIYLQ 

       250        260        270        280 
PEDEVWLEIF FNDQNGLFSD PGWADSLFSG FLLYVDTDYL DSISEDDEL

« Hide

References

[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J.
Tissue: Lung.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J.
Tissue: Mammary gland.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK078818 mRNA. Translation: BAC37409.1.
BC038308 mRNA. Translation: AAH38308.1.
IPIIPI00225832.
RefSeqNP_001128644.1. NM_001135172.1.
NP_780634.2. NM_175425.4.
UniGeneMm.275553.

3D structure databases

ProteinModelPortalQ8BVD7.
SMRQ8BVD7. Positions 145-275.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8BVD7.

PTM databases

PhosphoSiteQ8BVD7.

Proteomic databases

PRIDEQ8BVD7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000076939; ENSMUSP00000076206; ENSMUSG00000061535.
ENSMUST00000121872; ENSMUSP00000113520; ENSMUSG00000061535.
GeneID109323.
KEGGmmu:109323.

Organism-specific databases

CTD114905.
MGIMGI:1925911. C1qtnf7.

Phylogenomic databases

GeneTreeENSGT00590000082736.
HOGENOMHBG444750.
HOVERGENHBG108220.
InParanoidQ8BVD7.
OMARGKTGPL.
OrthoDBEOG4MPHR3.

Gene expression databases

ArrayExpressQ8BVD7.
BgeeQ8BVD7.
CleanExMM_C1QTNF7.
GenevestigatorQ8BVD7.
GermOnlineENSMUSG00000061535. Mus musculus.

Family and domain databases

InterProIPR001073. C1q.
IPR008160. Collagen.
IPR008983. Tumour_necrosis_fac-like.
[Graphical view]
Gene3DG3DSA:2.60.120.40. Tumour_necrosis_fac-like. 1 hit.
PfamPF00386. C1q. 1 hit.
PF01391. Collagen. 2 hits.
[Graphical view]
PRINTSPR00007. COMPLEMNTC1Q.
SMARTSM00110. C1Q. 1 hit.
[Graphical view]
SUPFAMSSF49842. TNF_like. 1 hit.
PROSITEPS50871. C1Q. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio361913.
SOURCESearch...

Entry information

Entry nameC1QT7_MOUSE
AccessionPrimary (citable) accession number: Q8BVD7
Secondary accession number(s): Q8CHX9
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: April 26, 2005
Last modified: September 21, 2011
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

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