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Q8BU88

- RM22_MOUSE

UniProt

Q8BU88 - RM22_MOUSE

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Protein
39S ribosomal protein L22, mitochondrial
Gene
Mrpl22
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L22, mitochondrial
Short name:
L22mt
Short name:
MRP-L22
Gene namesi
Name:Mrpl22
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 11

Organism-specific databases

MGIiMGI:1333794. Mrpl22.

Subcellular locationi

Mitochondrion By similarity

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
  2. mitochondrion Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 4040Mitochondrion By similarity
Add
BLAST
Chaini41 – 20616639S ribosomal protein L22, mitochondrial
PRO_0000261645Add
BLAST

Proteomic databases

MaxQBiQ8BU88.
PaxDbiQ8BU88.
PRIDEiQ8BU88.

PTM databases

PhosphoSiteiQ8BU88.

Expressioni

Gene expression databases

BgeeiQ8BU88.
CleanExiMM_MRPL22.
GenevestigatoriQ8BU88.

Interactioni

Protein-protein interaction databases

BioGridi229782. 5 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ8BU88.
SMRiQ8BU88. Positions 72-174.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG0091.
GeneTreeiENSGT00390000002110.
HOGENOMiHOG000048027.
HOVERGENiHBG093486.
InParanoidiQ8BU88.
KOiK02890.
OMAiNRIVYPP.
OrthoDBiEOG79CZ0R.
PhylomeDBiQ8BU88.
TreeFamiTF315111.

Family and domain databases

Gene3Di3.90.470.10. 1 hit.
InterProiIPR001063. Ribosomal_L22.
IPR005727. Ribosomal_L22_bac/chlpt-type.
[Graphical view]
PANTHERiPTHR13501. PTHR13501. 1 hit.
PfamiPF00237. Ribosomal_L22. 1 hit.
[Graphical view]
SUPFAMiSSF54843. SSF54843. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8BU88-1 [UniParc]FASTAAdd to Basket

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MAAALLRELG ALRVPNLRIW ATQTLRVLPP SCIHTSASLD ISRKWEKKNK    50
IVYPPQLPGE PRRPAEIYHC RRQIKYSKDK MWYLAKMIRG MSIDQALAQL 100
EFNDKKGAQI IKEVLLEAQD MAVRDHNVEF RSNLHIAEST SGRGQCLKRI 150
RYHGRGRFGI MEKVYCHYFV KLVEGPPPPP EVPKTAVDHA KDYIQQLRSR 200
TIIHTL 206
Length:206
Mass (Da):23,805
Last modified:March 1, 2003 - v1
Checksum:iB7326DC02BED3390
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti198 – 1981R → P in BAC36901. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK077615 mRNA. Translation: BAC36901.1.
AK086913 mRNA. Translation: BAC39761.1.
AK164417 mRNA. Translation: BAE37779.1.
AL928857 Genomic DNA. Translation: CAI26172.1.
BC061191 mRNA. Translation: AAH61191.1.
CCDSiCCDS24724.1.
RefSeqiNP_778166.2. NM_175001.3.
UniGeneiMm.259907.

Genome annotation databases

EnsembliENSMUST00000020820; ENSMUSP00000020820; ENSMUSG00000020514.
GeneIDi216767.
KEGGimmu:216767.
UCSCiuc007jap.3. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK077615 mRNA. Translation: BAC36901.1 .
AK086913 mRNA. Translation: BAC39761.1 .
AK164417 mRNA. Translation: BAE37779.1 .
AL928857 Genomic DNA. Translation: CAI26172.1 .
BC061191 mRNA. Translation: AAH61191.1 .
CCDSi CCDS24724.1.
RefSeqi NP_778166.2. NM_175001.3.
UniGenei Mm.259907.

3D structure databases

ProteinModelPortali Q8BU88.
SMRi Q8BU88. Positions 72-174.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 229782. 5 interactions.

PTM databases

PhosphoSitei Q8BU88.

Proteomic databases

MaxQBi Q8BU88.
PaxDbi Q8BU88.
PRIDEi Q8BU88.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000020820 ; ENSMUSP00000020820 ; ENSMUSG00000020514 .
GeneIDi 216767.
KEGGi mmu:216767.
UCSCi uc007jap.3. mouse.

Organism-specific databases

CTDi 29093.
MGIi MGI:1333794. Mrpl22.

Phylogenomic databases

eggNOGi COG0091.
GeneTreei ENSGT00390000002110.
HOGENOMi HOG000048027.
HOVERGENi HBG093486.
InParanoidi Q8BU88.
KOi K02890.
OMAi NRIVYPP.
OrthoDBi EOG79CZ0R.
PhylomeDBi Q8BU88.
TreeFami TF315111.

Miscellaneous databases

NextBioi 375302.
PROi Q8BU88.
SOURCEi Search...

Gene expression databases

Bgeei Q8BU88.
CleanExi MM_MRPL22.
Genevestigatori Q8BU88.

Family and domain databases

Gene3Di 3.90.470.10. 1 hit.
InterProi IPR001063. Ribosomal_L22.
IPR005727. Ribosomal_L22_bac/chlpt-type.
[Graphical view ]
PANTHERi PTHR13501. PTHR13501. 1 hit.
Pfami PF00237. Ribosomal_L22. 1 hit.
[Graphical view ]
SUPFAMi SSF54843. SSF54843. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Embryo, Eye and Lung.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiRM22_MOUSE
AccessioniPrimary (citable) accession number: Q8BU88
Secondary accession number(s): Q8BK04
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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