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Protein
Submitted name:

Putative uncharacterized protein

Gene

Mrpl18

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. 5S rRNA binding Source: MGI
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. rRNA import into mitochondrion Source: MGI
  2. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Mrpl18Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1914931. Mrpl18.

Subcellular locationi

GO - Cellular componenti

  1. extracellular space Source: MGI
  2. mitochondrion Source: MGI
  3. ribosome Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiQ8BTQ6.
ExpressionAtlasiQ8BTQ6. baseline and differential.
GenevestigatoriQ8BTQ6.

Structurei

3D structure databases

ProteinModelPortaliQ8BTQ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG001529.

Family and domain databases

InterProiIPR005484. Ribosomal_L18/L5.
[Graphical view]
PfamiPF00861. Ribosomal_L18p. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8BTQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GWATVWPNRE FWHRLRVVKT QHHVEAFVEH LNGQVVVSAS TREWAIKKHL
60 70 80 90 100
YSTRNVVACE SIGRVLAQRC LEAGINFMVY QPTPWEASSD SIKRLQNAMT
110
ESGVMLREPR RIYE
Length:114
Mass (Da):13,277
Last modified:March 1, 2003 - v1
Checksum:i19BAA5C21246788A
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK089039 mRNA. Translation: BAC40714.1.
UniGeneiMm.290166.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK089039 mRNA. Translation: BAC40714.1.
UniGeneiMm.290166.

3D structure databases

ProteinModelPortaliQ8BTQ6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1914931. Mrpl18.

Phylogenomic databases

HOVERGENiHBG001529.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiQ8BTQ6.
ExpressionAtlasiQ8BTQ6. baseline and differential.
GenevestigatoriQ8BTQ6.

Family and domain databases

InterProiIPR005484. Ribosomal_L18/L5.
[Graphical view]
PfamiPF00861. Ribosomal_L18p. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2000)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2004)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NODImported.
    Tissue: ThymusImported.

Entry informationi

Entry nameiQ8BTQ6_MOUSE
AccessioniPrimary (citable) accession number: Q8BTQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: February 4, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.