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Protein
Submitted name:

Putative uncharacterized protein

Gene

Mmp16

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • bone development Source: MGI
  • chondrocyte proliferation Source: MGI
  • collagen catabolic process Source: MGI
  • craniofacial suture morphogenesis Source: MGI
  • embryonic cranial skeleton morphogenesis Source: MGI
  • endochondral ossification Source: MGI
  • ossification Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Mmp16Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1276107. Mmp16.

Expressioni

Gene expression databases

BgeeiQ8BSA6.
ExpressionAtlasiQ8BSA6. baseline and differential.
GenevisibleiQ8BSA6. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029881.

Structurei

3D structure databases

ProteinModelPortaliQ8BSA6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000217928.
HOVERGENiHBG063063.
KOiK07996.

Family and domain databases

Gene3Di2.110.10.10. 1 hit.
InterProiIPR000585. Hemopexin-like_dom.
IPR018487. Hemopexin-like_repeat.
IPR028697. MMP16.
IPR021805. Pept_M10A_metallopeptidase_C.
[Graphical view]
PANTHERiPTHR10201:SF26. PTHR10201:SF26. 1 hit.
PfamiPF11857. DUF3377. 1 hit.
PF00045. Hemopexin. 2 hits.
[Graphical view]
SMARTiSM00120. HX. 2 hits.
[Graphical view]
SUPFAMiSSF50923. SSF50923. 1 hit.
PROSITEiPS51642. HEMOPEXIN_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8BSA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DVGKTYFFKG DRYWRYSEEM KTMDPGYPKP ITIWKGIPES PQGAFVHKEN
60 70 80 90 100
GFTYFYKGKE YWKFNNQILK VEPGYPRSIL KDFMGCDGPT DRDKEGLSPP
110 120 130 140 150
DDVDIVIKLD NTASTVKAIA IVIPCILALC LLVLVYTVFQ FKRKGTPRHI
160
LYCKRSMQEW V
Length:161
Mass (Da):18,689
Last modified:March 1, 2003 - v1
Checksum:iE9E9616306C1ED0C
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034828 mRNA. Translation: BAC28845.1.
RefSeqiNP_062698.2. NM_019724.3.
UniGeneiMm.187315.

Genome annotation databases

GeneIDi17389.
KEGGimmu:17389.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034828 mRNA. Translation: BAC28845.1.
RefSeqiNP_062698.2. NM_019724.3.
UniGeneiMm.187315.

3D structure databases

ProteinModelPortaliQ8BSA6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029881.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi17389.
KEGGimmu:17389.

Organism-specific databases

CTDi4325.
MGIiMGI:1276107. Mmp16.

Phylogenomic databases

HOGENOMiHOG000217928.
HOVERGENiHBG063063.
KOiK07996.

Miscellaneous databases

ChiTaRSiMmp16. mouse.
NextBioi292008.
SOURCEiSearch...

Gene expression databases

BgeeiQ8BSA6.
ExpressionAtlasiQ8BSA6. baseline and differential.
GenevisibleiQ8BSA6. MM.

Family and domain databases

Gene3Di2.110.10.10. 1 hit.
InterProiIPR000585. Hemopexin-like_dom.
IPR018487. Hemopexin-like_repeat.
IPR028697. MMP16.
IPR021805. Pept_M10A_metallopeptidase_C.
[Graphical view]
PANTHERiPTHR10201:SF26. PTHR10201:SF26. 1 hit.
PfamiPF11857. DUF3377. 1 hit.
PF00045. Hemopexin. 2 hits.
[Graphical view]
SMARTiSM00120. HX. 2 hits.
[Graphical view]
SUPFAMiSSF50923. SSF50923. 1 hit.
PROSITEiPS51642. HEMOPEXIN_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Embryonic body between diaphragm region and neckImported.

Entry informationi

Entry nameiQ8BSA6_MOUSE
AccessioniPrimary (citable) accession number: Q8BSA6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: June 24, 2015
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.