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Q8BSA6

- Q8BSA6_MOUSE

UniProt

Q8BSA6 - Q8BSA6_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Mmp16

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metalloendopeptidase activity Source: InterPro
    2. zinc ion binding Source: InterPro

    GO - Biological processi

    1. bone development Source: MGI
    2. chondrocyte proliferation Source: MGI
    3. collagen catabolic process Source: MGI
    4. craniofacial suture morphogenesis Source: MGI
    5. embryonic cranial skeleton morphogenesis Source: MGI
    6. endochondral ossification Source: MGI
    7. ossification Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Mmp16Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1276107. Mmp16.

    Expressioni

    Gene expression databases

    ArrayExpressiQ8BSA6.
    BgeeiQ8BSA6.
    GenevestigatoriQ8BSA6.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8BSA6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000217928.
    HOVERGENiHBG063063.
    InParanoidiQ8BSA6.
    KOiK07996.

    Family and domain databases

    Gene3Di2.110.10.10. 1 hit.
    InterProiIPR000585. Hemopexin-like_dom.
    IPR018487. Hemopexin-like_repeat.
    IPR028697. MMP16.
    IPR021805. Pept_M10A_metallopeptidase_C.
    [Graphical view]
    PANTHERiPTHR10201:SF26. PTHR10201:SF26. 1 hit.
    PfamiPF11857. DUF3377. 1 hit.
    PF00045. Hemopexin. 2 hits.
    [Graphical view]
    SMARTiSM00120. HX. 2 hits.
    [Graphical view]
    SUPFAMiSSF50923. SSF50923. 1 hit.
    PROSITEiPS51642. HEMOPEXIN_2. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q8BSA6-1 [UniParc]FASTAAdd to Basket

    « Hide

    DVGKTYFFKG DRYWRYSEEM KTMDPGYPKP ITIWKGIPES PQGAFVHKEN    50
    GFTYFYKGKE YWKFNNQILK VEPGYPRSIL KDFMGCDGPT DRDKEGLSPP 100
    DDVDIVIKLD NTASTVKAIA IVIPCILALC LLVLVYTVFQ FKRKGTPRHI 150
    LYCKRSMQEW V 161
    Length:161
    Mass (Da):18,689
    Last modified:March 1, 2003 - v1
    Checksum:iE9E9616306C1ED0C
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK034828 mRNA. Translation: BAC28845.1.
    RefSeqiNP_062698.2. NM_019724.3.
    UniGeneiMm.187315.

    Genome annotation databases

    GeneIDi17389.
    KEGGimmu:17389.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK034828 mRNA. Translation: BAC28845.1 .
    RefSeqi NP_062698.2. NM_019724.3.
    UniGenei Mm.187315.

    3D structure databases

    ProteinModelPortali Q8BSA6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 17389.
    KEGGi mmu:17389.

    Organism-specific databases

    CTDi 4325.
    MGIi MGI:1276107. Mmp16.

    Phylogenomic databases

    HOGENOMi HOG000217928.
    HOVERGENi HBG063063.
    InParanoidi Q8BSA6.
    KOi K07996.

    Miscellaneous databases

    ChiTaRSi MMP16. mouse.
    NextBioi 292008.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q8BSA6.
    Bgeei Q8BSA6.
    Genevestigatori Q8BSA6.

    Family and domain databases

    Gene3Di 2.110.10.10. 1 hit.
    InterProi IPR000585. Hemopexin-like_dom.
    IPR018487. Hemopexin-like_repeat.
    IPR028697. MMP16.
    IPR021805. Pept_M10A_metallopeptidase_C.
    [Graphical view ]
    PANTHERi PTHR10201:SF26. PTHR10201:SF26. 1 hit.
    Pfami PF11857. DUF3377. 1 hit.
    PF00045. Hemopexin. 2 hits.
    [Graphical view ]
    SMARTi SM00120. HX. 2 hits.
    [Graphical view ]
    SUPFAMi SSF50923. SSF50923. 1 hit.
    PROSITEi PS51642. HEMOPEXIN_2. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: Embryonic body between diaphragm region and neckImported.

    Entry informationi

    Entry nameiQ8BSA6_MOUSE
    AccessioniPrimary (citable) accession number: Q8BSA6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)